RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 GPR52Q9Y2T5 361 aa19.96■□□□□ 0.79
TRIM54-202ENST00000380075 PIP5K1CO60331 668 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CT62P0C5K7 136 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 TSPAN19P0C672 248 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 TYRP1P17643 537 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 RORCP51449 518 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF155Q12901 538 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 C1orf61Q13536 156 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 TPBGQ13641 420 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 EXOSC7Q15024 291 aaKnown RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZNHIT3Q15649 155 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 TCEAL6Q6IPX3 200 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF613Q6PF04 617 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 LYSMD2Q8IV50 215 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 MCATQ8IVS2 390 aaKnown RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CACTIN-AS1Q8N1I8 211 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 PARP16Q8N5Y8 322 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 TCEAL3Q969E4 200 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 LMF2Q9BU23 707 aaKnown RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 NCDNQ9UBB6 729 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF223Q9UK11 482 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 MRPS33Q9Y291 106 aaKnown RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 UNC119BA6NIH7 251 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 B4DGG1 531 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CHST10O43529 356 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CBX7O95931 251 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 HTR2AP28223 471 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 HTR1FP30939 366 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 SPEM2Q0P670 501 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 KRR1Q13601 381 aaKnown RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZSWIM7Q19AV6 140 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 LIPKQ5VXJ0 399 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 SLC23A3Q6PIS1 610 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CCDC190Q86UF4 302 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF761Q86XN6 746 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 TMEM239Q8WW34 195 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF559Q9BR84 538 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 JAM3Q9BX67 310 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 FN3KQ9H479 309 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 CAPN10Q9HC96 672 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 KCNE5Q9UJ90 142 aa19.95■□□□□ 0.78
TRIM54-202ENST00000380075 EXOGQ9Y2C4 368 aaKnown RBP19.95■□□□□ 0.78
TRIM54-202ENST00000380075 ZFHX2Q9C0A1 2572 aaPredicted RBP19.94■□□□□ 0.78
TRIM54-202ENST00000380075 NTN1O95631 604 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 RNH1P13489 461 aaKnown RBP19.94■□□□□ 0.78
TRIM54-202ENST00000380075 FASLGP48023 281 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 CDC20Q12834 499 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 DSG2Q14126 1118 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 ELOCQ15369 112 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 ASCL5Q7RTU5 278 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF438Q7Z4V0 828 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 RABEPKQ7Z6M1 372 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 SNX29P2Q8IUI4 249 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 GID4Q8IVV7 300 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 CDK20Q8IZL9 346 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 OR52R1Q8NGF1 315 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 OR52L1Q8NGH7 329 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 OR9A4Q8NGU2 314 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 UFD1Q92890 307 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 TCTN2Q96GX1 697 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 HS6ST2Q96MM7 605 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 CPNE5Q9HCH3 593 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 STARD5Q9NSY2 213 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 SPIN1Q9Y657 262 aaPredicted RBP19.94■□□□□ 0.78
TRIM54-202ENST00000380075 PEX12O00623 359 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 LYPD3O95274 346 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 IL1AP01583 271 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 DRD5P21918 477 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 GCGRP47871 477 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 FIGNL1Q6PIW4 674 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 GRAMD2AQ8IUY3 354 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 PSD4Q8NDX1 1056 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 SLC35B4Q969S0 331 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 CEP19Q96LK0 163 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 CD180Q99467 661 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 SMURF1Q9HCE7 757 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 ABCB10Q9NRK6 738 aa19.94■□□□□ 0.78
TRIM54-202ENST00000380075 H2AFY2Q9P0M6 372 aaPredicted RBP19.94■□□□□ 0.78
TRIM54-202ENST00000380075 CDC42EP2O14613 210 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 RPS19P39019 145 aaKnown RBP19.93■□□□□ 0.78
TRIM54-202ENST00000380075 CD97P48960 835 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 NXPH1P58417 271 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 RUNX1T1Q06455 604 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 AGAP7PQ5VUJ5 663 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 SLC22A16Q86VW1 577 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 ZNF595Q8IYB9 648 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 SAMD8Q96LT4 415 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 ARHGAP9Q9BRR9 750 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 CCDC32Q9BV29 185 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.93■□□□□ 0.78
TRIM54-202ENST00000380075 UBQLN3Q9H347 655 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 TMEM27Q9HBJ8 222 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 FBXO34Q9NWN3 711 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 SIDT1Q9NXL6 827 aaKnown RBP19.93■□□□□ 0.78
TRIM54-202ENST00000380075 CARD8Q9Y2G2 431 aa19.93■□□□□ 0.78
TRIM54-202ENST00000380075 IQCMA0A1B0GVH7 501 aa19.92■□□□□ 0.78
TRIM54-202ENST00000380075 GXYLT2A0PJZ3 443 aa19.92■□□□□ 0.78
TRIM54-202ENST00000380075 KHNYNO15037 678 aaKnown RBP19.92■□□□□ 0.78
TRIM54-202ENST00000380075 TBX1O43435 398 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 522.4 ms