RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 MMABQ96EY8 250 aaPredicted RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 CD180Q99467 661 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 HCAR1Q9BXC0 346 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 KRCC1Q9NPI7 259 aaPredicted RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 MRPS18AQ9NVS2 196 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SOHLH2Q9NX45 425 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 PCDHGB6Q9Y5F9 930 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 A0A0C4DFX4 3053 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 NKX2-2O95096 273 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 PROS1P07225 676 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 SRFP11831 508 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 TNFSF8P32971 234 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNF45Q02386 682 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 COL19A1Q14993 1142 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 CARTPTQ16568 116 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 CRTC2Q53ET0 693 aaPredicted RBP17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 ZCCHC12Q6PEW1 402 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 THSD4Q6ZMP0 1018 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 CXXC5Q7LFL8 322 aaKnown RBP17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 GATAD2AQ86YP4 633 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 SIRT6Q8N6T7 355 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 RFKQ969G6 155 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 PPP1R14BQ96C90 147 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 BPIFA2Q96DR5 249 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 RNF31Q96EP0 1072 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 ART5Q96L15 291 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 SECISBP2Q96T21 854 aaKnown RBP17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 MAU2Q9Y6X3 613 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 RNH1P13489 461 aaKnown RBP17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 CD38P28907 300 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 RORCP51449 518 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 CAV3P56539 151 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 INSL4Q14641 139 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 PRTGQ2VWP7 1150 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 TUBA3EQ6PEY2 450 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 LAX1Q8IWV1 398 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 CADM3Q8N126 398 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 HS6ST2Q96MM7 605 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 TBC1D17Q9HA65 648 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 MEPEQ9NQ76 525 aaPredicted RBP17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 FLRT3Q9NZU0 649 aa17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 TMEM184BQ9Y519 407 aaPredicted RBP17.8■□□□□ 0.44
PCDHA4-201ENST00000378125 TMEM129A0AVI4 362 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 CSF2P04141 144 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 SPNP16150 400 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 CAPZBP47756 277 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 SLC16A1P53985 500 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 KCNAB1Q14722 419 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 ELOCQ15369 112 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 KLHL12Q53G59 568 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 CADM2Q8N3J6 435 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 CLIP3Q96DZ5 547 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 DCLRE1CQ96SD1 692 aaKnown RBP17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 TMED9Q9BVK6 235 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 IFT27Q9BW83 186 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 FOXQ1Q9C009 403 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 PRTFDC1Q9NRG1 225 aa17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 EXOSC1Q9Y3B2 195 aaKnown RBP17.79■□□□□ 0.44
PCDHA4-201ENST00000378125 IGHV5-51A0A0C4DH38 117 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 LOC110117498-PIK3R3F6TDL0 507 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 DLGAP3O95886 979 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 BMP7P18075 431 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 SDC2P34741 201 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 HNRNPA0Q13151 305 aaKnown RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 TDGQ13569 410 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNHIT3Q15649 155 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNF181Q2M3W8 571 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 ZMAT1Q5H9K5 638 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 NPSR1Q6W5P4 371 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 CCDC190Q86UF4 302 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 RBM12BQ8IXT5 1001 aaKnown RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 RCBTB1Q8NDN9 531 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 OR52L1Q8NGH7 329 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 SMAP2Q8WU79 429 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 UFD1Q92890 307 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 SPRTNQ9H040 489 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 TMEM27Q9HBJ8 222 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 ERVK-19Q9WJR5 959 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 THADAQ6YHU6 1953 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 COQ9O75208 318 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 IFNA16P05015 189 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 MSL3P1P0C860 447 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 TBXA2RP21731 343 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 MLLT3P42568 568 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 FABP5Q01469 135 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 AMZ1Q400G9 498 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 NXNL2Q5VZ03 156 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 GDPGP1Q6ZNW5 385 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 TOR1AIP2Q8NFQ8 470 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 SPRYD4Q8WW59 207 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 SLC30A2Q9BRI3 323 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 ARHGAP9Q9BRR9 750 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 YIPF2Q9BWQ6 316 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 PHF7Q9BWX1 381 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 CRNNQ9UBG3 495 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 MED31Q9Y3C7 131 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 TNRC18O15417 2968 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 PCDH15Q96QU1 1955 aa17.78■□□□□ 0.44
PCDHA4-201ENST00000378125 ABCA7Q8IZY2 2146 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms