RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 AP3D1O14617 1153 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 NUDT14O95848 222 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CST1P01037 141 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 PRG2P13727 222 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 ENDOUP21128 410 aaKnown RBP11.84□□□□□ -0.51
CBWD3-203ENST00000377344 ADH7P40394 386 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 PLAURQ03405 335 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 ZNF117Q03924 483 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 NRF1Q16656 503 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 FNDC7Q5VTL7 733 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 RANBP3LQ86VV4 465 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CYP4Z1Q86W10 505 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 GRAMD2AQ8IUY3 354 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 PAPD5Q8NDF8 572 aaKnown RBP11.84□□□□□ -0.51
CBWD3-203ENST00000377344 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 LRTOMTQ8WZ04 291 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 SIGLEC12Q96PQ1 595 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
CBWD3-203ENST00000377344 DCLRE1BQ9H816 532 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 TIMMDC1Q9NPL8 285 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 SDHAF3Q9NRP4 125 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 SACM1LQ9NTJ5 587 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CNIH4Q9P003 139 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 NDUFAF4Q9P032 175 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CNOT11Q9UKZ1 510 aaKnown RBP11.84□□□□□ -0.51
CBWD3-203ENST00000377344 WIF1Q9Y5W5 379 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 CPAMD8Q8IZJ3 1885 aa11.84□□□□□ -0.51
CBWD3-203ENST00000377344 A0A087WV48 116 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 OR5H15A6NDH6 313 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 CPSF4LA6NMK7 179 aaKnown RBP11.83□□□□□ -0.51
CBWD3-203ENST00000377344 J3KTA2 159 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 OIP5O43482 229 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 SLC25A12O75746 678 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 FASP25445 335 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 C17orf67Q0P5P2 114 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 SKP2Q13309 424 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 SNTA1Q13424 505 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 GANABQ14697 944 aaKnown RBP11.83□□□□□ -0.51
CBWD3-203ENST00000377344 NPTX1Q15818 432 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 ZNF550Q7Z398 422 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 MISPQ8IVT2 679 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 JSRP1Q96MG2 331 aaPredicted RBP11.83□□□□□ -0.51
CBWD3-203ENST00000377344 ZNF300Q96RE9 604 aaPredicted RBP11.83□□□□□ -0.51
CBWD3-203ENST00000377344 MCHR1Q99705 422 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 ENPP4Q9Y6X5 453 aa11.83□□□□□ -0.51
CBWD3-203ENST00000377344 CEACAM4O75871 244 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 NEURL1O76050 574 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 ATP6V1G2O95670 118 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 LINGO3P0C6S8 592 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 FCGR1AP12314 374 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 PTGDSP41222 190 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 MAGEA2P43356 314 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 MASP1P48740 699 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 GAS1P54826 345 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 SESN3P58005 492 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 GPR85P60893 370 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 PLEKHM3Q6ZWE6 761 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 AMIGO2Q86SJ2 522 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 PACS2Q86VP3 889 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF227Q86WZ6 799 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF440Q8IYI8 595 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 B4GALNT2Q8NHY0 566 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 ANGPTL4Q9BY76 406 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 LAT2Q9GZY6 243 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 EVA1AQ9H8M9 152 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 SH2D2AQ9NP31 389 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 KLHL1Q9NR64 748 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 RHCGQ9UBD6 479 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 TESQ9UGI8 421 aaKnown RBP11.83□□□□□ -0.52
CBWD3-203ENST00000377344 NTNG1Q9Y2I2 539 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 TESMINQ9Y4I5 508 aa11.83□□□□□ -0.52
CBWD3-203ENST00000377344 NINQ8N4C6 2090 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 TMEM8BA6NDV4 472 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 GNB5O14775 395 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 EIF4E2O60573 245 aaKnown RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 TPST2O60704 377 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ADAM11O75078 769 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 LDLRP01130 860 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ANPEPP15144 967 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 RHCEP18577 417 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 DNASE1L1P49184 302 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 P2RX1P51575 399 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF136P52737 540 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 TAS2R41P59536 307 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 COPZ1P61923 177 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 SPIBQ01892 262 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 PIN1Q13526 163 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 RIPK1Q13546 671 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 INPP5JQ15735 1006 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 COL28A1Q2UY09 1125 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ENTPD8Q5MY95 495 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 FBXW10Q5XX13 1052 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 TMEM81Q6P7N7 255 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 PIWIL3Q7Z3Z3 882 aaKnown RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 TSEN54Q7Z6J9 526 aaKnown RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 CADM2Q8N3J6 435 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms