RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IFNW1P05000 195 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 EIF4EP06730 217 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ACPPP15309 386 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PRPH2P23942 346 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 CNTN1Q12860 1018 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 HTR4Q13639 388 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 MICBQ29980 383 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 XKR6Q5GH73 641 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 HBMQ6B0K9 141 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SLC25A25Q6KCM7 469 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 KIAA1211LQ6NV74 962 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 TMUB2Q71RG4 321 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 RTL10Q7L3V2 364 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 CMIPQ8IY22 773 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PXT1Q8NFP0 134 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 LRR1Q96L50 414 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF285Q96NJ3 590 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ARHGAP9Q9BRR9 750 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PTDSS2Q9BVG9 487 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 EBPLQ9BY08 206 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ARL6Q9H0F7 186 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 POLR2J3Q9H1A7 115 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SLC6A20Q9NP91 592 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 NIT2Q9NQR4 276 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 CHST2Q9Y4C5 530 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 C2orf92A0A1B0GVN3 265 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SHISA3A0PJX4 238 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 WRBO00258 174 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 LATO43561 262 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SUSD5O60279 629 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 HTR3BO95264 441 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PAK4O96013 591 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 APODP05090 189 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 IGFBP1P08833 259 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 CD3GP09693 182 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 AMD1P17707 334 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 NPR2P20594 1047 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ACADLP28330 430 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SIGLEC14Q08ET2 396 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 RAB40BQ12829 278 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SNTB2Q13425 540 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SCARB2Q14108 478 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SYT14P1Q58G82 188 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 B3GLCTQ6Y288 498 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 WDR53Q7Z5U6 358 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 VRK3Q8IV63 474 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 C2orf73Q8N5S3 287 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ARIH2OSQ8N7S6 290 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 UBTD2Q8WUN7 234 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ECHDC3Q96DC8 303 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ABHD1Q96SE0 405 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 CDCA3Q99618 268 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 IFT27Q9BW83 186 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 POLDIP3Q9BY77 421 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 C20orf85Q9H1P6 137 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 FGF20Q9NP95 211 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 TAS2R3Q9NYW6 316 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 BTNL2Q9UIR0 455 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 MTCH2Q9Y6C9 303 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 TMEM82A0PJX8 343 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 DISC1C4P0D8 188 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 FAM227AF5H4B4 570 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 NARSO43776 548 aaKnown RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 OR10H3O60404 316 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 STK16O75716 305 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 ATG12O94817 140 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 DRD5P21918 477 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 VIPR1P32241 457 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CTSCP53634 463 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 B4GALNT1Q00973 533 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 STX4Q12846 297 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 TRAPPC5Q8IUR0 188 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 LCORQ96JN0 433 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF582Q96NG8 517 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 TSNAXQ99598 290 aaKnown RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CPEB1Q9BZB8 566 aaKnown RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 PRSS16Q9NQE7 514 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CA5BQ9Y2D0 317 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 TRPM6Q9BX84 2022 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 A0A1B0GVC2 190 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 A6NIN4 97 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CD8B2A6NJW9 211 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CHST10O43529 356 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 PCCBP05166 539 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CD8BP10966 210 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 CELP19835 753 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 HSD17B2P37059 387 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 SEC61A1P61619 476 aaKnown RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 FCRLBQ6BAA4 426 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 SEZ6L2Q6UXD5 910 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 PGAP1Q75T13 922 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 SLC16A13Q7RTY0 426 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 HDDC3Q8N4P3 179 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms