RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 NEIL2Q969S2 332 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 RNFT2Q96EX2 444 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 TMEM19Q96HH6 336 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 RADILQ96JH8 1075 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC38A2Q96QD8 506 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 OR52A5Q9H2C5 316 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 WASH6PQ9NQA3 447 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 MIEF1Q9NQG6 463 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF275Q9NSD4 429 aaPredicted RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 LRIT1Q9P2V4 623 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 COMMD3Q9UBI1 195 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 CPNE7Q9UBL6 633 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 A4GNTQ9UNA3 340 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 RIF1Q5UIP0 2472 aaKnown RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 LY6G6EA0A0G2JKS1 128 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 KIR2DS5A0A0G2JLQ3 304 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 A0A0G2JNG1 304 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 DCDC2BA2VCK2 349 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TUBAL3A6NHL2 446 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 OR5K4A6NMS3 321 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 RHPN2P1A8MT19 583 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 KIR2DS3K7RE56 304 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TM4SF5O14894 197 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 BET1O15155 118 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PPM1DO15297 605 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 AKAP8O43823 692 aaKnown RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 HPGDSO60760 199 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC16A8O95907 504 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 BCHEP06276 602 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TPOP07202 933 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 DDCP20711 480 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 FRKP42685 505 aaPredicted RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PPM1FP49593 454 aaPredicted RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MAPK12P53778 367 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 RAG2P55895 527 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SHC2P98077 582 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 HHEXQ03014 270 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 BAMBIQ13145 260 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLBPQ14493 270 aaKnown RBP eCLIP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 KIR2DS5Q14953 304 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MLC1Q15049 377 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CDONQ4KMG0 1287 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PLA1AQ53H76 456 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CD276Q5ZPR3 534 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC9B2Q86UD5 537 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 LRRC28Q86X40 367 aaPredicted RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TBC1D19Q8N5T2 526 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 HORMAD2Q8N7B1 307 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 LSMEM1Q8N8F7 131 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 OR5AK3PQ8NH89 298 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC7A13Q8TCU3 470 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 GNPDA2Q8TDQ7 276 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TFGQ92734 400 aaPredicted RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 OR2M2Q96R28 347 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 FERD3LQ96RJ6 166 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CDC6Q99741 560 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC6A16Q9GZN6 736 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CXorf36Q9H7Y0 433 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 B3GAT2Q9NPZ5 323 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MED17Q9NVC6 651 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 GLTPQ9NZD2 209 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 COPZ2Q9P299 210 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC9A8Q9Y2E8 581 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SPEF1Q9Y4P9 236 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CLCA3PQ9Y6N3 262 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 U3KQA8 63 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 FAM227AF5H4B4 570 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 AKR7A2O43488 359 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TNFSF14O43557 240 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SEMA7AO75326 666 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PDGFAP04085 211 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 LIMS3P0CW19 117 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 LIMS4P0CW20 117 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PEPDP12955 493 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 GLB1P16278 677 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 NPPBP16860 134 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CD53P19397 219 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TNNI3P19429 210 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MTNR1AP48039 350 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 RFX3P48380 749 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MTNR1BP49286 362 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 DUSP3P51452 185 aaPredicted RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 NOVA1P51513 510 aaKnown RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 CASP9P55211 416 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 MC1RQ01726 317 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SNAPC1Q16533 368 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC27A4Q6P1M0 643 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 PODNL1Q6PEZ8 512 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 NXPE4Q6UWF7 544 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TEX261Q6UWH6 196 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 DEF8Q6ZN54 512 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 KLHL36Q8N4N3 616 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 WDR48Q8TAF3 677 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 BBS10Q8TAM1 723 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 BAHD1Q8TBE0 780 aaPredicted RBP10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TEX47Q8TBZ9 253 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 IFI44Q8TCB0 444 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 HGDQ93099 445 aa10.66□□□□□ -0.7
TSPAN1-201ENST00000372003 TMEM203Q969S6 136 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms