RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 CBX1P83916 185 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 SKP2Q13309 424 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 FGFBP1Q14512 234 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 SLC10A1Q14973 349 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 C3AR1Q16581 482 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 GLIPR1L2Q4G1C9 344 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 DCST1Q5T197 706 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
CCNC-203ENST00000369220 REEP3Q6NUK4 255 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 GFRALQ6UXV0 394 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 C3P1Q6ZMU1 363 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 TRILQ7L0X0 811 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 TRPM8Q7Z2W7 1104 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 NET1Q7Z628 596 aaPredicted RBP9.37□□□□□ -0.91
CCNC-203ENST00000369220 CALHM3Q86XJ0 350 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 FAM156AQ8NDB6 213 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 OR52P1PQ8NH57 321 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 CNOT9Q92600 299 aaKnown RBP9.37□□□□□ -0.91
CCNC-203ENST00000369220 HOXD1Q9GZZ0 328 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 MTHFD2LQ9H903 347 aaPredicted RBP9.37□□□□□ -0.91
CCNC-203ENST00000369220 POLE3Q9NRF9 147 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 TAS2R10Q9NYW0 307 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 SH3BGRL2Q9UJC5 107 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 TINAGQ9UJW2 476 aa9.37□□□□□ -0.91
CCNC-203ENST00000369220 HECTD1Q9ULT8 2610 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 DCHS2Q6V1P9 2916 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 PTPN13Q12923 2485 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 IGLV3-32A0A0A0MS00 114 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 C5orf58C9J3I9 102 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 NPIPA2E9PIF3 369 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 NPIPA3F8WFD2 350 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 ZNF264O43296 627 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 FRS3O43559 492 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 TPST1O60507 370 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 EPPINO95925 133 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 IGHG3P01860 377 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 HPNP05981 417 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 NID1P14543 1247 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 RYKP34925 604 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 PGM1P36871 562 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 PCBP3P57721 371 aaKnown RBP9.36□□□□□ -0.91
CCNC-203ENST00000369220 ZNF836Q6ZNA1 936 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 CLIP4Q8N3C7 705 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 TMCO5AQ8N6Q1 288 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 SMYD1Q8NB12 490 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 C11orf65Q8NCR3 313 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 OR14L1PQ8NHC6 308 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 C1GALT1C1Q96EU7 318 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 WFDC6Q9BQY6 131 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 LDAHQ9H6V9 325 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 BCL2L10Q9HD36 194 aa9.36□□□□□ -0.91
CCNC-203ENST00000369220 THUMPD1Q9NXG2 353 aaKnown RBP9.36□□□□□ -0.91
CCNC-203ENST00000369220 FLNBO75369 2602 aaKnown RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 TRGV5A0A0B4J1U4 118 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 CDHR4A6H8M9 788 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 TMEM247A6NEH6 219 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 PRORSD1PA6NEY8 169 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 H0YC42 278 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 GTPBP1O00178 669 aaKnown RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 SLC19A2O60779 497 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 UBOX5O94941 541 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 NUDT14O95848 222 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 ESRRAP11474 423 aaPredicted RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 MSX2P35548 267 aaPredicted RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 CPOXP36551 454 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 TPD52P55327 224 aaPredicted RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 PSME3P61289 254 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 HOXC5Q00444 222 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 DMTNQ08495 405 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 KRT72Q14CN4 511 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 ZNF630Q2M218 657 aaPredicted RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 VMACQ2NL98 169 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 RAET1LQ5VY80 246 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 ARHGAP11AQ6P4F7 1023 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 PEX5LQ8IYB4 626 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 GHDCQ8N2G8 530 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 RBM15BQ8NDT2 890 aaKnown RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 ST6GALNAC3Q8NDV1 305 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 FAM71CQ8NEG0 241 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 OR5M9Q8NGP3 310 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 B4GALNT2Q8NHY0 566 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 WDR60Q8WVS4 1066 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 SH3GL1Q99961 368 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 ALG2Q9H553 416 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 ACKR4Q9NPB9 350 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 SPAG4Q9NPE6 437 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 SDHAF3Q9NRP4 125 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 MED17Q9NVC6 651 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 ABCD2Q9UBJ2 740 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 DKKL1Q9UK85 242 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 ZNF443Q9Y2A4 671 aaPredicted RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
CCNC-203ENST00000369220 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 C15orf38-AP3S2A0A0A6YYH1 394 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 A0A0G2JPF8 293 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 HNRNPCL2B2RXH8 293 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 HNRNPCL3B7ZW38 293 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 H3BNH8 94 aa9.35□□□□□ -0.91
CCNC-203ENST00000369220 AP3D1O14617 1153 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms