RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TRAM2Q15035 370 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 ZIK1Q3SY52 487 aaPredicted RBP21.93■■□□□ 1.1
SNX3-203ENST00000368979 PODNL1Q6PEZ8 512 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 ZNF550Q7Z398 422 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 GDF7Q7Z4P5 450 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 SLC41A3Q96GZ6 507 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 ZNF559Q9BR84 538 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 ZNF160Q9HCG1 818 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 ASCL3Q9NQ33 180 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 PCDHGA6Q9Y5G7 932 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 PCSK5Q92824 1860 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 WDFY3Q8IZQ1 3526 aa21.93■■□□□ 1.1
SNX3-203ENST00000368979 EXPH5Q8NEV8 1989 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 H0YAE9 185 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 FOXD4Q12950 439 aaPredicted RBP21.92■■□□□ 1.1
SNX3-203ENST00000368979 EFR3AQ14156 821 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 OR1Q1Q15612 314 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 NDUFAF6Q330K2 333 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 LYPD8Q6UX82 237 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 POGLUT1Q8NBL1 392 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 CYGBQ8WWM9 190 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 NKD1Q969G9 470 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 KRT84Q9NSB2 600 aa21.92■■□□□ 1.1
SNX3-203ENST00000368979 TRAPPC13A5PLN9 417 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 ALG1L2C9J202 215 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 HPP00738 406 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 UBL4AP11441 157 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 KCNAB2Q13303 367 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 IL10RAQ13651 578 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 GALNT5Q7Z7M9 940 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 DTX1Q86Y01 620 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 ZNF440Q8IYI8 595 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 AQP11Q8NBQ7 271 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 SLC22A8Q8TCC7 542 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 NIPSNAP1Q9BPW8 284 aa21.91■■□□□ 1.1
SNX3-203ENST00000368979 ZBTB20Q9HC78 741 aaPredicted RBP21.91■■□□□ 1.1
SNX3-203ENST00000368979 EXOSC3Q9NQT5 275 aaKnown RBP21.91■■□□□ 1.1
SNX3-203ENST00000368979 CDV3Q9UKY7 258 aaKnown RBP21.91■■□□□ 1.1
SNX3-203ENST00000368979 ZFHX2Q9C0A1 2572 aaPredicted RBP21.91■■□□□ 1.1
SNX3-203ENST00000368979 FADS1O60427 444 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 LYPD3O95274 346 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 SKP2Q13309 424 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 ZNF613Q6PF04 617 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 LINC00471Q8N535 108 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 SLC15A4Q8N697 577 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 GATSQ8NAP1 163 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 TOR1AIP2Q8NFQ8 470 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 PHOSPHO1Q8TCT1 267 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 HGDQ93099 445 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 SLC38A4Q969I6 547 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 CNBD2Q96M20 576 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 RTN4RQ9BZR6 473 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 FAM118AQ9NWS6 357 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 FBXL4Q9UKA2 621 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 A0A087WUU8 490 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 OR10H3O60404 316 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 OR2J2O76002 312 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 ADAP00813 363 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 ITGAMP11215 1152 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 CDH2P19022 906 aaPredicted RBP21.9■■□□□ 1.1
SNX3-203ENST00000368979 EVI2BP34910 448 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 PDK3Q15120 406 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 USP51Q70EK9 711 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 MRGPREQ86SM8 312 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 LSMEM1Q8N8F7 131 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 OR4K5Q8NGD3 323 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 ARSGQ96EG1 525 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 RASL10BQ96S79 203 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 PRSS27Q9BQR3 290 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 PAPOLBQ9NRJ5 636 aaKnown RBP21.9■■□□□ 1.1
SNX3-203ENST00000368979 UBAP1Q9NZ09 502 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 SLC7A7Q9UM01 511 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 MGAT4BQ9UQ53 548 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 POFUT2Q9Y2G5 429 aa21.9■■□□□ 1.1
SNX3-203ENST00000368979 MRPS18BQ9Y676 258 aaKnown RBP21.9■■□□□ 1.1
SNX3-203ENST00000368979 H3BNH8 94 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 ZNF264O43296 627 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 OIP5O43482 229 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 GFRA3O60609 400 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 GASTP01350 101 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 RPSAP08865 295 aaKnown RBP21.89■■□□□ 1.09
SNX3-203ENST00000368979 GNAO1P09471 354 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 MYF6P23409 242 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 TMED10P49755 219 aaKnown RBP21.89■■□□□ 1.09
SNX3-203ENST00000368979 FBXW4P57775 412 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 IL1RL1Q01638 556 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 PGBD2Q6P3X8 592 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 NKAIN4Q8IVV8 208 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 ARMC10Q8N2F6 343 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 ADAMTS17Q8TE56 1095 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 RNF138Q8WVD3 245 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 GABARAPL3Q9BY60 117 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 TRIM2Q9C040 744 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 TMEM27Q9HBJ8 222 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 P4HTMQ9NXG6 502 aa21.89■■□□□ 1.09
SNX3-203ENST00000368979 A0A0B4J2E0 115 aa21.88■■□□□ 1.09
SNX3-203ENST00000368979 A0A1B0GX12 115 aa21.88■■□□□ 1.09
SNX3-203ENST00000368979 ADAM10O14672 748 aa21.88■■□□□ 1.09
SNX3-203ENST00000368979 DXOO77932 396 aaKnown RBP21.88■■□□□ 1.09
SNX3-203ENST00000368979 FBXO45P0C2W1 286 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms