RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 CHFRQ96EP1 664 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 CACYBPQ9HB71 228 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 ASXL3Q9C0F0 2248 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 A0A087WV48 116 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 HMX3A6NHT5 357 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PRODHO43272 600 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 SPINT1O43278 529 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 LILRB5O75023 590 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 NOS1APO75052 506 aaPredicted RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 UBXN7O94888 489 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 EIF4EP06730 217 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 NT5EP21589 574 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 P2RX3P56373 397 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 GABREP78334 506 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 CSNK1G2P78368 415 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 C1orf53Q5VUE5 145 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 ANKRD54Q6NXT1 300 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 XKRXQ6PP77 449 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 VITQ6UXI7 678 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 C10orf53Q8N6V4 93 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 C17orf47Q8NEP4 570 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 UBE2E3Q969T4 207 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 OTUB2Q96DC9 234 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 MAP6Q96JE9 813 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PDCD1LG2Q9BQ51 273 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 MED28Q9H204 178 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 OR52A5Q9H2C5 316 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 CD93Q9NPY3 652 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 ING3Q9NXR8 418 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 MYEF2Q9P2K5 600 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 EIF3KQ9UBQ5 218 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 MGAT4AQ9UM21 535 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 COLQQ9Y215 455 aaPredicted RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 WDR45Q9Y484 360 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 A3GALT2U3KPV4 340 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 ABHD14A-ACY1A0A1B0GW23 586 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 IDSB3KWA1 339 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 CHST10O43529 356 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 TP53P04637 393 aaPredicted RBP8.27□□□□□ -1.08
THBS3-201ENST00000368378 PROS1P07225 676 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 BMP7P18075 431 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 PTGS2P35354 604 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 PPM1AP35813 382 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 SOX2P48431 317 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 ZNF81P51508 661 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 AGFG1P52594 562 aaKnown RBP8.27□□□□□ -1.08
THBS3-201ENST00000368378 AP2S1P53680 142 aaPredicted RBP8.27□□□□□ -1.08
THBS3-201ENST00000368378 CDK3Q00526 305 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 RPA4Q13156 261 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 DSG2Q14126 1118 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 MZT2BQ6NZ67 158 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 CXXC5Q7LFL8 322 aaKnown RBP8.27□□□□□ -1.08
THBS3-201ENST00000368378 LRRC56Q8IYG6 542 aaPredicted RBP8.27□□□□□ -1.08
THBS3-201ENST00000368378 GPR135Q8IZ08 494 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 OR2L2Q8NH16 312 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 OR4K13Q8NH42 304 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 TSACCQ96A04 125 aaPredicted RBP8.27□□□□□ -1.08
THBS3-201ENST00000368378 MS4A3Q96HJ5 214 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 ALG8Q9BVK2 526 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 AICDAQ9GZX7 198 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 IL23AQ9NPF7 189 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 KLHL28Q9NXS3 571 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 ZNF780BQ9Y6R6 833 aa8.27□□□□□ -1.08
THBS3-201ENST00000368378 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 C4orf47A7E2U8 309 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 CENPBD1B2RD01 187 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 RGS13O14921 159 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 ACP2P11117 423 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 CXCL3P19876 107 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 UBE2MP61081 183 aaKnown RBP8.27□□□□□ -1.09
THBS3-201ENST00000368378 ERV3-1Q14264 604 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 KCNAB1Q14722 419 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 PLK5Q496M5 336 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 KLHL22Q53GT1 634 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 HES5Q5TA89 166 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 ERN2Q76MJ5 926 aaKnown RBP8.27□□□□□ -1.09
THBS3-201ENST00000368378 KLHL36Q8N4N3 616 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 SDR9C7Q8NEX9 313 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 OR52E1Q8NGJ3 308 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 TMEM163Q8TC26 289 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 AP3S1Q92572 193 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 MSANTD3Q96H12 275 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 PPP1R16AQ96I34 528 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 C4orf36Q96KX1 117 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 COQ10AQ96MF6 247 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 SEMA4CQ9C0C4 833 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 WDR26Q9H7D7 661 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 FKRPQ9H9S5 495 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 C3orf14Q9HBI5 128 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 CUL9Q8IWT3 2517 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 LRIT2A6NDA9 550 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 PPP1R3DO95685 299 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 ZNF888P0CJ79 500 aaPredicted RBP8.27□□□□□ -1.09
THBS3-201ENST00000368378 RAC2P15153 192 aa8.27□□□□□ -1.09
THBS3-201ENST00000368378 POLR2CP19387 275 aaPredicted RBP8.27□□□□□ -1.09
THBS3-201ENST00000368378 ACADLP28330 430 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms