RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DSCR3O14972 297 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 KCNK2O95069 426 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 WNT1P04628 370 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 TSPAN19P0C672 248 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 HTR1FP30939 366 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 GPR4P46093 362 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 DHPSP49366 369 aaPredicted RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 CTBP2P56545 445 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 PPP1CAP62136 330 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 RUNX1T1Q06455 604 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 ATP1A4Q13733 1029 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 SERTAD2Q14140 314 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 EXOSC7Q15024 291 aaKnown RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 TMPRSS11FQ6ZWK6 438 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 ZNF550Q7Z398 422 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
USF1-202ENST00000368020 PHC2Q8IXK0 858 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 FANK1Q8TC84 345 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 ZDHHC12Q96GR4 267 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 DGAT2Q96PD7 388 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 PRR14Q9BWN1 585 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 ALOXE3Q9BYJ1 711 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 FOLH1BQ9HBA9 442 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 Q9N2J8 555 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 PRTFDC1Q9NRG1 225 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 PILRBQ9UKJ0 227 aa12.99□□□□□ -0.33
USF1-202ENST00000368020 FAM86C2PA6NEL3 165 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 CHP2O43745 196 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 UPK1BO75841 260 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 THY1P04216 161 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 ADRA2AP08913 450 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 HBQ1P09105 142 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 CT62P0C5K7 136 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 CKMT1AP12532 417 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 GCGRP47871 477 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 RORCP51449 518 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 MAZP56270 477 aaKnown RBP12.98□□□□□ -0.33
USF1-202ENST00000368020 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
USF1-202ENST00000368020 HOXC5Q00444 222 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 ACSM1Q08AH1 577 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 TPBGQ13641 420 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 MAPK14Q16539 360 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 AMZ1Q400G9 498 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 AADACL4Q5VUY2 407 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 PEAR1Q5VY43 1037 aaPredicted RBP12.98□□□□□ -0.33
USF1-202ENST00000368020 RABEPKQ7Z6M1 372 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 C17orf82Q86X59 251 aaPredicted RBP12.98□□□□□ -0.33
USF1-202ENST00000368020 SIMC1Q8NDZ2 872 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 LMX1AQ8TE12 382 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 UFD1Q92890 307 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 PRSS27Q9BQR3 290 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 PDE7BQ9NP56 450 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 EXOSC4Q9NPD3 245 aaKnown RBP12.98□□□□□ -0.33
USF1-202ENST00000368020 STARD5Q9NSY2 213 aa12.98□□□□□ -0.33
USF1-202ENST00000368020 EXOGQ9Y2C4 368 aaKnown RBP12.98□□□□□ -0.33
USF1-202ENST00000368020 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
USF1-202ENST00000368020 FITM1A5D6W6 292 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 LMO7DNF2Z398 122 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 I3L1I5 382 aaPredicted RBP12.97□□□□□ -0.33
USF1-202ENST00000368020 PEX12O00623 359 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SLC30A4O14863 429 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 HCN1O60741 890 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 GPX5O75715 221 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SNX4O95219 450 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 IL1AP01583 271 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 S1PR1P21453 382 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 HTR2AP28223 471 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 TGFBR1P36897 503 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ETV5P41161 510 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SOX3P41225 446 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 CRYBB2P43320 205 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 CAPZA2P47755 286 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ETV1P50549 477 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 NXPH1P58417 271 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ZNF141Q15928 474 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 CLEC12AQ5QGZ9 265 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SLC30A6Q6NXT4 461 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 FIGNL1Q6PIW4 674 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 PLEKHG7Q6ZR37 379 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SFTPA2Q8IWL1 248 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 LSMEM1Q8N8F7 131 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 LRFN5Q96NI6 719 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 MAP3K3Q99759 626 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ASPNQ9BXN1 380 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SP140LQ9H930 580 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ERVMER34-1Q9H9K5 563 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ENAMQ9NRM1 1142 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 SIDT1Q9NXL6 827 aaKnown RBP12.97□□□□□ -0.33
USF1-202ENST00000368020 PRODH2Q9UF12 536 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 ZNF223Q9UK11 482 aaPredicted RBP12.97□□□□□ -0.33
USF1-202ENST00000368020 GSTK1Q9Y2Q3 226 aa12.97□□□□□ -0.33
USF1-202ENST00000368020 AQP9O43315 295 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms