RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KDM4DQ6B0I6 523 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 SLC15A4Q8N697 577 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 FAM71CQ8NEG0 241 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 SLC7A13Q8TCU3 470 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ADAMTS17Q8TE56 1095 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 RASL10BQ96S79 203 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ZNF559Q9BR84 538 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 TBL1XR1Q9BZK7 514 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 TMEFF2Q9UIK5 374 aaPredicted RBP14.31□□□□□ -0.12
CTSA-202ENST00000354880 MASP2O00187 686 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 FADS1O60427 444 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ADAM11O75078 769 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ITGA10O75578 1167 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 SNAP29O95721 258 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 THRBP10828 461 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ITGAMP11215 1152 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 UBL4AP11441 157 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ANXA8P13928 327 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 SDHBP21912 280 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 IGFBP5P24593 272 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ACAA2P42765 397 aaKnown RBP14.31□□□□□ -0.12
CTSA-202ENST00000354880 RTP5Q14D33 572 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 OR1Q1Q15612 314 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 NDUFAF6Q330K2 333 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 C6orf52Q5T4I8 152 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 FAHD1Q6P587 224 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ZNF440Q8IYI8 595 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 POGLUT1Q8NBL1 392 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 OR5M3Q8NGP4 307 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 TMCO6Q96DC7 493 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 SLC41A3Q96GZ6 507 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 NAF1Q96HR8 494 aaKnown RBP14.31□□□□□ -0.12
CTSA-202ENST00000354880 IP6K3Q96PC2 410 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 FEVQ99581 238 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 PSD2Q9BQI7 771 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 FUZQ9BT04 418 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 Q9H521 79 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ANKRD19PQ9H560 264 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 ORC6Q9Y5N6 252 aa14.31□□□□□ -0.12
CTSA-202ENST00000354880 HEATR5AQ86XA9 2040 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 TRAPPC13A5PLN9 417 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 ARRDC5A6NEK1 342 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 GTPBP1O00178 669 aaKnown RBP14.3□□□□□ -0.12
CTSA-202ENST00000354880 FAAHO00519 579 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 ZNF264O43296 627 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 NDUFB5O43674 189 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 FBXO45P0C2W1 286 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 ENDOUP21128 410 aaKnown RBP14.3□□□□□ -0.12
CTSA-202ENST00000354880 RAD23AP54725 363 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 MERTKQ12866 999 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 ATP1A4Q13733 1029 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 TRAM2Q15035 370 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 SEC23BQ15437 767 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 RFX4Q33E94 735 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 CMPK2Q5EBM0 449 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 WLSQ5T9L3 541 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 LYPD8Q6UX82 237 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 NUP54Q7Z3B4 507 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 SLC5A8Q8N695 610 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 OR9Q2Q8NGE9 314 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 TTC9Q92623 222 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 HGDQ93099 445 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 ARSGQ96EG1 525 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 ADI1Q9BV57 179 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 TRIM2Q9C040 744 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 TMEM27Q9HBJ8 222 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 EXOSC3Q9NQT5 275 aaKnown RBP14.3□□□□□ -0.12
CTSA-202ENST00000354880 LRCH1Q9Y2L9 728 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 YARS2Q9Y2Z4 477 aaKnown RBP14.3□□□□□ -0.12
CTSA-202ENST00000354880 PCSK5Q92824 1860 aa14.3□□□□□ -0.12
CTSA-202ENST00000354880 SH3PXD2BA1X283 911 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 THY1P04216 161 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 SERPINA7P05543 415 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 RYKP34925 604 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 Q0VFX4 171 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 EPS8Q12929 822 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 CHAF1BQ13112 559 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 SKP2Q13309 424 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 ZIK1Q3SY52 487 aaPredicted RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 PODNL1Q6PEZ8 512 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 ZNF613Q6PF04 617 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 GDF7Q7Z4P5 450 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 MARCH3Q86UD3 253 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 RPS19BP1Q86WX3 136 aaKnown RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 ARMC10Q8N2F6 343 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 LINC00471Q8N535 108 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 DHRSXQ8N5I4 330 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 LSMEM1Q8N8F7 131 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 TFAP2CQ92754 450 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 SLC38A4Q969I6 547 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 NODALQ96S42 347 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 RTN4RQ9BZR6 473 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 CDCP1Q9H5V8 836 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 KRT84Q9NSB2 600 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 SLC7A7Q9UM01 511 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 CARD8Q9Y2G2 431 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 DENRO43583 198 aaKnown RBP14.29□□□□□ -0.12
CTSA-202ENST00000354880 OR10H3O60404 316 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 ANGPTL1O95841 491 aa14.29□□□□□ -0.12
CTSA-202ENST00000354880 LIFP15018 202 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms