RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DPP4P27487 766 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 SRD5A2P31213 254 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 ADH7P40394 386 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 SUMO3P55854 103 aaPredicted RBP10.78□□□□□ -0.68
SNCA-202ENST00000345009 KCNJ10P78508 379 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 MXRA7P84157 204 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 SCARB2Q14108 478 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 GLYR1Q49A26 553 aaPredicted RBP10.78□□□□□ -0.68
SNCA-202ENST00000345009 CMPK2Q5EBM0 449 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 PDZK1Q5T2W1 519 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 FNDC7Q5VTL7 733 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 ERICH5Q6P6B1 374 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 AAGABQ6PD74 315 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 APOOLQ6UXV4 268 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 HIPK4Q8NE63 616 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 BHLHE22Q8NFJ8 381 aaPredicted RBP10.78□□□□□ -0.68
SNCA-202ENST00000345009 TOR1AIP2Q8NFQ8 470 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 OR10A6Q8NH74 314 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 OR14L1PQ8NHC6 308 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 B4GALNT2Q8NHY0 566 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 MAL2Q969L2 176 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 SARAFQ96BY9 339 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 TSPAN10Q9H1Z9 355 aaPredicted RBP10.78□□□□□ -0.68
SNCA-202ENST00000345009 SLC38A1Q9H2H9 487 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 UBQLN3Q9H347 655 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 TAS2R10Q9NYW0 307 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 MED11Q9P086 117 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 PRDM4Q9UKN5 801 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 ZNF407Q9C0G0 2248 aa10.78□□□□□ -0.68
SNCA-202ENST00000345009 NPIPA5A0A0B4J1W7 369 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 NPIPA7E9PJI5 369 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 FXYD1O00168 92 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 DNAJA2O60884 412 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 CYP7B1O75881 506 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 CBX6O95503 412 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 IFNA14P01570 189 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 IGHG3P01860 377 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 C1QCP02747 245 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 THBS1P07996 1170 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 NPIPA8P0DM63 369 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 NID1P14543 1247 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 ABOP16442 354 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 PTGS2P35354 604 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 EIF1P41567 113 aaKnown RBP10.77□□□□□ -0.69
SNCA-202ENST00000345009 P2RX1P51575 399 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 FUT5Q11128 374 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 CBFBQ13951 182 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 SF3B4Q15427 424 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNCA-202ENST00000345009 LIN52Q52LA3 116 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 C16orf89Q6UX73 402 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 TRILQ7L0X0 811 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 ZNF440Q8IYI8 595 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 EID3Q8N140 333 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 FITM2Q8N6M3 262 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 TMCO5AQ8N6Q1 288 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 FADS6Q8N9I5 356 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 GATSQ8NAP1 163 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 OR2M3Q8NG83 312 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 OR52P1PQ8NH57 321 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 NFKBIDQ8NI38 313 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 NEIL3Q8TAT5 605 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 WDR60Q8WVS4 1066 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 SH3YL1Q96HL8 342 aaPredicted RBP10.77□□□□□ -0.69
SNCA-202ENST00000345009 REXO5Q96IC2 774 aaKnown RBP10.77□□□□□ -0.69
SNCA-202ENST00000345009 SLC39A3Q9BRY0 314 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 LAT2Q9GZY6 243 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 IKZF5Q9H5V7 419 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 SLC13A4Q9UKG4 626 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 ACAD8Q9UKU7 415 aa10.77□□□□□ -0.69
SNCA-202ENST00000345009 FASNP49327 2511 aaKnown RBP10.77□□□□□ -0.69
SNCA-202ENST00000345009 GTF3C1Q12789 2109 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 A0A1B0GVC2 190 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 PRAMEF27A3QJZ7 478 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 J3QKU1 62 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 AQP7O14520 342 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 PRRG2O14669 202 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 BCKDKO14874 412 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 GMNNO75496 209 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 ACTL6AO96019 429 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 HK1P19367 917 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 CALB2P22676 271 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 SLC6A8P48029 635 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 CCR4P51679 360 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 TDGF1P3P51864 188 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 PSME3P61289 254 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 FGFBP1Q14512 234 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 ADRM1Q16186 407 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 IGFBP7Q16270 282 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 EIPR1Q53HC9 387 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 RABL3Q5HYI8 236 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 ZNF311Q5JNZ3 666 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 ENPP6Q6UWR7 440 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 TRPM8Q7Z2W7 1104 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 NET1Q7Z628 596 aaPredicted RBP10.76□□□□□ -0.69
SNCA-202ENST00000345009 PATL1Q86TB9 770 aaKnown RBP10.76□□□□□ -0.69
SNCA-202ENST00000345009 IFNEQ86WN2 208 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 SPPL2CQ8IUH8 684 aa10.76□□□□□ -0.69
SNCA-202ENST00000345009 FAM83FQ8NEG4 500 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms