RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PLEKHJ1Q9NW61 149 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 STYXL1Q9Y6J8 313 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ADAMTS9Q9P2N4 1935 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 FAM237AA0A1B0GTK4 181 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TP53I11O14683 189 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SRPX2O60687 465 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 DPM1O60762 260 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 FHP07954 510 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 MTHFD2P13995 350 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 CD99P14209 185 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 F2RL1P55085 397 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 EMX2Q04743 252 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TROAPQ12815 778 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PMS2P11Q13670 270 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ELOBQ15370 118 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 C4orf19Q8IY42 314 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 NLGN1Q8N2Q7 840 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 MINDY1Q8N5J2 469 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 NIPA2Q8N8Q9 360 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SLC2A12Q8TD20 617 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 KIAA1191Q96A73 305 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ANKRD9Q96BM1 317 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 PLA2G12BQ9BX93 195 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 KCTD3Q9Y597 815 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 OR2T1O43869 369 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PIRTP0C851 137 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ZNF17P17021 662 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 RFX5P48382 616 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 NDST2P52849 883 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 KRTDAPP60985 99 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 NKX3-2P78367 333 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 MALLQ13021 153 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GLYR1Q49A26 553 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 ALKBH2Q6NS38 261 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TMUB2Q71RG4 321 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GPR155Q7Z3F1 870 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TRAM1L1Q8N609 369 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GPX8Q8TED1 209 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SHC3Q92529 594 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 BTN2A3PQ96KV6 586 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 G6PC3Q9BUM1 346 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 OR10A5Q9H207 317 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GHRLQ9UBU3 117 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ZDHHC2Q9UIJ5 367 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PTPRUQ92729 1446 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 STRCP1A6NGW2 1772 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 A0A1W2PPK0 400 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 POM121BA6NF01 834 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 FAM24AA6NFZ4 105 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ACOD1A6NK06 481 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ACTL6BO94805 426 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 UQCRC2P22695 453 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 HTR3AP46098 478 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SF3B4Q15427 424 aaKnown RBP eCLIP5.84□□□□□ -1.47
VCAN-203ENST00000343200 RPE65Q16518 533 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 KCTD11Q693B1 232 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TMPRSS11FQ6ZWK6 438 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 DPPA4Q7L190 304 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 LYSMD3Q7Z3D4 306 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ILDR1Q86SU0 546 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 JSRP1Q96MG2 331 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 SPNS1Q9H2V7 528 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 SLC39A9Q9NUM3 307 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 CLDN24A6NM45 220 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 XRCC3O43542 346 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 CCR7P32248 378 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GCGRP47871 477 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 KCNQ1P51787 676 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PPP4CP60510 307 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 RPL24P83731 157 aaKnown RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 RAB40BQ12829 278 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GPR176Q14439 515 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 HAGHQ16775 308 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TTC32Q5I0X7 151 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 LRRC73Q5JTD7 316 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 FAM171A1Q5VUB5 890 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GPR135Q8IZ08 494 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 BPIFCQ8NFQ6 507 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 RHOXF1Q8NHV9 184 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 DCLRE1CQ96SD1 692 aaKnown RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 RDH14Q9HBH5 336 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 A0A1W2PQ45 241 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 A0A1W2PQY0 241 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 C1QTNF3-AMACRE9PGA6 284 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 MTX2O75431 263 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 PAGE1O75459 146 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 STSP08842 583 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ACSM4P0C7M7 580 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 RNH1P13489 461 aaKnown RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 HLA-DMAP28067 261 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GABRB3P28472 473 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 GLUD2P49448 558 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 WDR4P57081 412 aaKnown RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 TAS2R40P59535 323 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ADAM5Q6NVV9 412 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 MBOAT1Q6ZNC8 495 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 NLRC3Q7RTR2 1065 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 TBC1D20Q96BZ9 403 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 MRPL38Q96DV4 380 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms