RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF281Q9Y2X9 895 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 FOXO6A8MYZ6 492 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 HPGDSO60760 199 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CH25HO95992 272 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 HOXA10P31260 410 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 STK19P49842 368 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CATR1Q13166 79 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 Q499Y3 187 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GGTA1PQ4G0N0 100 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 HEPHL1Q6MZM0 1159 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 H3F3CQ6NXT2 135 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 C14orf80Q86SX3 495 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CNTN4Q8IWV2 1026 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 DAZLQ92904 295 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM175Q9BSA9 504 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 XYLT2Q9H1B5 865 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PIGVQ9NUD9 493 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PRKAB1Q9Y478 270 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 VNN1O95497 513 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CALCBP10092 127 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ACPPP15309 386 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 IL1R2P27930 398 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CCR7P32248 378 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SOX3P41225 446 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PCBD1P61457 104 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SNRPGP62308 76 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 RAB11AP62491 216 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LTB4RQ15722 352 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ACOT6Q3I5F7 207 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 FAM74A1Q5RGS3 127 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 USP50Q70EL3 339 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR2L13Q8N349 312 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 DCAF4L2Q8NA75 395 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC2A12Q8TD20 617 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 HLA-CQ95604 372 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SCLYQ96I15 445 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PCYT2Q99447 389 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CTRCQ99895 268 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ERVMER34-1Q9H9K5 563 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR6C2Q9NZP2 312 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TESQ9UGI8 421 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 EVLQ9UI08 416 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF337Q9Y3M9 751 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 NIPSNAP2O75323 286 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 TK1P04183 234 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 FOLR1P15328 257 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 ANXA7P20073 488 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 GCSHP23434 173 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 KLRK1P26718 216 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 SULT1A2P50226 295 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 FAM117BQ6P1L5 589 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 DCBLD1Q8N8Z6 715 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 NUP43Q8NFH3 380 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 RPL3LQ92901 407 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 NKX3-1Q99801 234 aaPredicted RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 METTL17Q9H7H0 456 aaPredicted RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 V9GYS6 101 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 SCN4AP35499 1836 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 MED1Q15648 1581 aaPredicted RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 CD53P19397 219 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 TPPP2P59282 170 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 RPS13P62277 151 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 UGCGQ16739 394 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 PHYHD1Q5SRE7 291 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 MEPCEQ7L2J0 689 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 OR1S2Q8NGQ3 325 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 FBRSQ9HAH7 460 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 ATP13A2Q9NQ11 1180 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 TLR9Q9NR96 1032 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 CCDC85CA6NKD9 419 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 FABP7O15540 132 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 SIX3O95343 332 aaPredicted RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 CPNE6O95741 557 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 MAT2AP31153 395 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 SEC61A1P61619 476 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 SP2Q02086 613 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 LTBQ06643 244 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 MADCAM1Q13477 382 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 CERS5Q8N5B7 392 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 NRG4Q8WWG1 115 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 DDX1Q92499 740 aaKnown RBP5.21□□□□□ -1.57
PTPRB-202ENST00000334414 FEVQ99581 238 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 TGIF2Q9GZN2 237 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 OR1A2Q9Y585 309 aa5.21□□□□□ -1.57
PTPRB-202ENST00000334414 DDX60Q8IY21 1712 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TRDV1A0A1B0GX56 115 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SYNGR4O95473 234 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CSTAP01040 98 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SLC5A2P31639 672 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 MEP1BQ16820 701 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SYT6Q5T7P8 510 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 INTS5Q6P9B9 1019 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ASPGQ86U10 573 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR4K5Q8NGD3 323 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR1J2Q8NGS2 313 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 KCNG3Q8TAE7 436 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 IMP4Q96G21 291 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF300Q96RE9 604 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TMPRSS5Q9H3S3 457 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms