RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MED11Q9P086 117 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 AP4S1Q9Y587 144 aa14.08□□□□□ -0.16
PDLIM5-202ENST00000318007 SEMA7AO75326 666 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 FKBP6O75344 327 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 NTN1O95631 604 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 LGI1O95970 557 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 PDGFAP04085 211 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 P04436 131 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 FABP3P05413 133 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 THBS1P07996 1170 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 PTGDSP41222 190 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 MASP1P48740 699 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 NPTX1Q15818 432 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 MTX3Q5HYI7 312 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 POMZP3Q6PJE2 187 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 C19orf48Q6RUI8 117 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 TSPYL5Q86VY4 417 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 CADM2Q8N3J6 435 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 OR52J3Q8NH60 311 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 LRTOMTQ8WZ04 291 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 MFRPQ9BY79 579 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 HOXD1Q9GZZ0 328 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 DEPPQ9NTK1 212 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 KLHL28Q9NXS3 571 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 LUZP4Q9P127 313 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 CACNA1GO43497 2377 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 A0A087WV48 116 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 OR5H15A6NDH6 313 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 ALG1L2C9J202 215 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 H3BNH8 94 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 H3BNX3 289 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF264O43296 627 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 IFNW1P05000 195 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 GPIP06744 558 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 FAM87AP0C7U9 286 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 NAGAP17050 411 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 MFAP5Q13361 173 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 PIN1Q13526 163 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 LAPTM4AQ15012 233 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 TOMM34Q15785 309 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 TBR1Q16650 682 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 FBXW10Q5XX13 1052 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 RTL4Q6ZR62 310 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 AMIGO2Q86SJ2 522 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 PAQR8Q8TEZ7 354 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF524Q96C55 264 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 DNAJA3Q96EY1 480 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 GNRHR2Q96P88 292 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 S100A14Q9HCY8 104 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF71Q9NQZ8 489 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 OLAHQ9NV23 265 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 PPP4R1LQ9P1A2 415 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 VDAC3Q9Y277 283 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 SLC9A8Q9Y2E8 581 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 TESMINQ9Y4I5 508 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 WIF1Q9Y5W5 379 aa14.07□□□□□ -0.16
PDLIM5-202ENST00000318007 RAP2AP10114 183 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 CLK3P49761 638 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 IST1P53990 364 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 TOMM20Q15388 145 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 COL28A1Q2UY09 1125 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 EIPR1Q53HC9 387 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 RNF220Q5VTB9 566 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 FNDC7Q5VTL7 733 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 DHRS4L2Q6PKH6 230 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 GALNTL5Q7Z4T8 443 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 TTC9Q92623 222 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 ABHD17AQ96GS6 310 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 CCM2LQ9NUG4 571 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 FBXL2Q9UKC9 423 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 ZMIZ1Q9ULJ6 1067 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 HEATR5AQ86XA9 2040 aa14.06□□□□□ -0.16
PDLIM5-202ENST00000318007 MAP1BP46821 2468 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 PINLYPA6NC86 204 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SHISA8B8ZZ34 492 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 WISP1O95388 367 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 CST1P01037 141 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 HTR2AP28223 471 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SLC7A1P30825 629 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SOX8P57073 446 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 PSPHP78330 225 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SKP2Q13309 424 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 TSEN54Q7Z6J9 526 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 OR52E4Q8NGH9 312 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 C7orf34Q96L11 122 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ARMC7Q9H6L4 198 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 PROK2Q9HC23 129 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SACM1LQ9NTJ5 587 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 NKX1-2Q9UD57 310 aaPredicted RBP14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 CNOT11Q9UKZ1 510 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 PCNX3Q9H6A9 2034 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 GNGT2O14610 69 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ADAM10O14672 748 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SEMG1P04279 462 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF136P52737 540 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 UCNP55089 124 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ENTPD8Q5MY95 495 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms