RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 UQCRC1P31930 480 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 MRPL58Q14197 206 aaKnown RBP12.64□□□□□ -0.39
RFFL-201ENST00000315249 PAGE3Q5JUK9 113 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 WBP2NLQ6ICG8 309 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 ZNF740Q8NDX6 193 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 OR5L1Q8NGL2 311 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 OR1N1Q8NGS0 311 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 ACOT12Q8WYK0 555 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 SLC6A7Q99884 636 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 BTNL2Q9UIR0 455 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 SVILO95425 2214 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 KDM4EB2RXH2 506 aaPredicted RBP12.64□□□□□ -0.39
RFFL-201ENST00000315249 CLDN25C9JDP6 229 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 RAC2P15153 192 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 RAB15P59190 212 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
RFFL-201ENST00000315249 PIGFQ07326 219 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 HLA-BQ31612 363 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 PYCR3Q53H96 274 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 METRNLQ641Q3 311 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 ARHGAP22Q7Z5H3 698 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 ZNF845Q96IR2 970 aaPredicted RBP12.64□□□□□ -0.39
RFFL-201ENST00000315249 EGLN2Q96KS0 407 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 MKS1Q9NXB0 559 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 UBAP1Q9NZ09 502 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 SNX11Q9Y5W9 270 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 CSNK1G3Q9Y6M4 447 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 ENPP4Q9Y6X5 453 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 CABIN1Q9Y6J0 2220 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 PLOD2O00469 737 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 TMEM196Q5HYL7 178 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 NIPAL3Q6P499 406 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
RFFL-201ENST00000315249 MUS81Q96NY9 551 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 ZNF226Q9NYT6 803 aa12.64□□□□□ -0.39
RFFL-201ENST00000315249 PTBP2Q9UKA9 531 aaKnown RBP12.64□□□□□ -0.39
RFFL-201ENST00000315249 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 ZNF264O43296 627 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 HACD2Q6Y1H2 254 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
RFFL-201ENST00000315249 SLC30A3Q99726 388 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 RNF6Q9Y252 685 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 TRAV27A0A087WT01 109 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 OR5K3A6NET4 321 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 TNFRSF10CO14798 259 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 FGF4P08620 206 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 CARD18P57730 90 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SELENOWP63302 87 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SAMD12Q8N8I0 201 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 PLA2G2FQ9BZM2 168 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 ZNF175Q9Y473 711 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 A0A1W2PPC4 97 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 RPS17P08708 135 aaKnown RBP12.63□□□□□ -0.39
RFFL-201ENST00000315249 DPP4P27487 766 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
RFFL-201ENST00000315249 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SGCZQ96LD1 299 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 EPHX3Q9H6B9 360 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 ZSCAN5BA6NJL1 495 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 PHYHO14832 338 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 GTF2F2P13984 249 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
RFFL-201ENST00000315249 SLC22A16Q86VW1 577 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 ZNF584Q8IVC4 421 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 KCNN1Q92952 543 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SMOC1Q9H4F8 434 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 POLHQ9Y253 713 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 FAM230AA0A1W2PPH8 454 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SMCO3A2RU48 225 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 OR14I1A6ND48 311 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 FAM189A1O60320 539 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 HBA1P69905 142 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 GABREP78334 506 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 EXT1Q16394 746 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 CLEC14AQ86T13 490 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 BEX2Q9BXY8 128 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 DEFB127Q9H1M4 99 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 BEX1Q9HBH7 125 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SPAG17Q6Q759 2223 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SIPA1L3O60292 1781 aaPredicted RBP12.63□□□□□ -0.39
RFFL-201ENST00000315249 PLXNB2O15031 1838 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 MMP2P08253 660 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 MTNR1AP48039 350 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 CCSMST1Q4G0I0 132 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 LMF1Q96S06 567 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 ZNF223Q9UK11 482 aaPredicted RBP12.63□□□□□ -0.39
RFFL-201ENST00000315249 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
RFFL-201ENST00000315249 SCN3AQ9NY46 2000 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 DPPA5A6NC42 116 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PCGF2P35227 344 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MPLP40238 635 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CCR5P51681 352 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CLDN17P56750 224 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 C17orf67Q0P5P2 114 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 TMEM69Q5SWH9 247 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms