RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 DSCR4P56555 118 aaPredicted RBP10.88□□□□□ -0.67
SCFD1-201ENST00000311943 FOXF1Q12946 379 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 RGNQ15493 299 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.88□□□□□ -0.673e-6■□□□□ 9.1
SCFD1-201ENST00000311943 ACSF3Q4G176 576 aaPredicted RBP10.88□□□□□ -0.67
SCFD1-201ENST00000311943 POMZP3Q6PJE2 187 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 GCNT2Q8N0V5 402 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 ATP6V1C2Q8NEY4 427 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 SLC38A5Q8WUX1 472 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 CNOT9Q92600 299 aaKnown RBP10.88□□□□□ -0.67
SCFD1-201ENST00000311943 SARAFQ96BY9 339 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 ELAC2Q9BQ52 826 aaKnown RBP10.88□□□□□ -0.67
SCFD1-201ENST00000311943 VKORC1Q9BQB6 163 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 WFDC6Q9BQY6 131 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 MED17Q9NVC6 651 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 QPCTLQ9NXS2 382 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 SERINC4A6NH21 518 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 AP3D1O14617 1153 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 ATP8B1O43520 1251 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 FRS3O43559 492 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 STX11O75558 287 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 TFPTP0C1Z6 253 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 PSMA4P25789 261 aaKnown RBP10.87□□□□□ -0.67
SCFD1-201ENST00000311943 MRPL19P49406 292 aaKnown RBP10.87□□□□□ -0.67
SCFD1-201ENST00000311943 KHKP50053 298 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 PLPPR5Q32ZL2 321 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 RNF145Q96MT1 663 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 TP63Q9H3D4 680 aaPredicted RBP10.87□□□□□ -0.67
SCFD1-201ENST00000311943 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 PHF3Q92576 2039 aaKnown RBP10.87□□□□□ -0.67
SCFD1-201ENST00000311943 A0A1W2PP18 115 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 OR14I1A6ND48 311 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 BCKDKO14874 412 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 KIAA0513O60268 411 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 NUDT14O95848 222 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 AQP1P29972 269 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 CASP6P55212 293 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 HOXC5Q00444 222 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 KLF10Q13118 480 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 GLIPR1L2Q4G1C9 344 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 LRIF1Q5T3J3 769 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 C1orf185Q5T7R7 199 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 BHLHB9Q6PI77 547 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 B3GNT6Q6ZMB0 384 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 TREML1Q86YW5 311 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 TMCO5AQ8N6Q1 288 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 B4GALNT2Q8NHY0 566 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 FIG4Q92562 907 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 TMEM19Q96HH6 336 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 THUMPD3Q9BV44 507 aaKnown RBP10.87□□□□□ -0.67
SCFD1-201ENST00000311943 PRDM14Q9GZV8 571 aa10.87□□□□□ -0.67
SCFD1-201ENST00000311943 CACNA1CQ13936 2221 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 A0A096LPI6 279 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 IGLV3-32A0A0A0MS00 114 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 TTC36A6NLP5 189 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 CLCA1A8K7I4 914 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
SCFD1-201ENST00000311943 NGFRP08138 427 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 GKN3PP0CG01 181 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 ZCCHC18P0CG32 403 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 TROVE2P10155 538 aaKnown RBP eCLIP10.86□□□□□ -0.67
SCFD1-201ENST00000311943 NR2F1P10589 423 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 PRG2P13727 222 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF708P17019 499 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 PGM1P36871 562 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 ATP4BP51164 291 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 DSTNP60981 165 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 SKP2Q13309 424 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF141Q15928 474 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 TMEM44Q2T9K0 475 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 RABL3Q5HYI8 236 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 NHSL2Q5HYW2 709 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 GGNQ86UU5 652 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF619Q8N2I2 560 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 CLIP4Q8N3C7 705 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 FBXO27Q8NI29 283 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 SAP130Q9H0E3 1048 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 RMND5AQ9H871 391 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 EXD2Q9NVH0 621 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
SCFD1-201ENST00000311943 DUXAA6NLW8 204 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 PRSS44E7EML9 344 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 NTN1O95631 604 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 CSTAP01040 98 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 PRF1P14222 555 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 CCNA2P20248 432 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 DRD4P21917 467 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 LSP1P33241 339 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 SFTPDP35247 375 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 SLC6A8P48029 635 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 ZNF136P52737 540 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 GNGT1P63211 74 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 ADRM1Q16186 407 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 ATAD3BQ5T9A4 648 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 SNX32Q86XE0 403 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 TRIML2Q8N7C3 387 aa10.85□□□□□ -0.67
SCFD1-201ENST00000311943 NFKBIDQ8NI38 313 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms