RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 RELTQ969Z4 430 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 WFDC6Q9BQY6 131 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 BCL2L10Q9HD36 194 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 THUMPD1Q9NXG2 353 aaKnown RBP8.25□□□□□ -1.09
PDE4D-201ENST00000309641 ICAM5Q9UMF0 924 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 CORO2BQ9UQ03 480 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 VDAC3Q9Y277 283 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 USP9XQ93008 2570 aaPredicted RBP8.25□□□□□ -1.09
PDE4D-201ENST00000309641 A0A0G2JPF8 293 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 ANKUB1A6NFN9 424 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 HNRNPCL2B2RXH8 293 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 HNRNPCL3B7ZW38 293 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 C5orf58C9J3I9 102 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 GTPBP1O00178 669 aaKnown RBP8.25□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF264O43296 627 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 HNRNPCL1O60812 293 aaKnown RBP8.25□□□□□ -1.09
PDE4D-201ENST00000309641 UBOX5O94941 541 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 EPPINO95925 133 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 IGHG3P01860 377 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 OPN1SWP03999 348 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 HNRNPCL4P0DMR1 293 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 EDN3P14138 238 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 NID1P14543 1247 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 IL7RP16871 459 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 CPOXP36551 454 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 CCR4P51679 360 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 PCBP3P57721 371 aaKnown RBP8.25□□□□□ -1.09
PDE4D-201ENST00000309641 B3GALT5-AS1P59052 145 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 PSME3P61289 254 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 DMTNQ08495 405 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 C3AR1Q16581 482 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 REEP3Q6NUK4 255 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 HACD2Q6Y1H2 254 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 C3P1Q6ZMU1 363 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF836Q6ZNA1 936 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 RINLQ6ZS11 566 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 SERPINA11Q86U17 422 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 C11orf65Q8NCR3 313 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 FAM156AQ8NDB6 213 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 ST6GALNAC3Q8NDV1 305 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 HIPK4Q8NE63 616 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 WDR60Q8WVS4 1066 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 C1GALT1C1Q96EU7 318 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 NSL1Q96IY1 281 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 LDAHQ9H6V9 325 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 ACKR4Q9NPB9 350 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 SDHAF3Q9NRP4 125 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 TAS2R10Q9NYW0 307 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 B4GALT7Q9UBV7 327 aa8.25□□□□□ -1.09
PDE4D-201ENST00000309641 TRGV5A0A0B4J1U4 118 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 NPIPA2E9PIF3 369 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 NPIPA3F8WFD2 350 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 AP3D1O14617 1153 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 FRS3O43559 492 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 GKN3PP0CG01 181 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 ESRRAP11474 423 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 PRG2P13727 222 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 SRD5A2P31213 254 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 RYKP34925 604 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 PCGF2P35227 344 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 MSX2P35548 267 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 ADH7P40394 386 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 STARP49675 285 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 GSK3BP49841 420 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 P2RX1P51575 399 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 DSCR4P56555 118 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 EEF1A1P68104 462 aaKnown RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 HOXC5Q00444 222 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 LIPEQ05469 1076 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF630Q2M218 657 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 VMACQ2NL98 169 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 KRTCAP3Q53RY4 240 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 EIF3MQ7L2H7 374 aaKnown RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 PEX5LQ8IYB4 626 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 GHDCQ8N2G8 530 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 TMCO5AQ8N6Q1 288 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 SMYD1Q8NB12 490 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 RBM15BQ8NDT2 890 aaKnown RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 FAM71CQ8NEG0 241 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 OR5M9Q8NGP3 310 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 OR14L1PQ8NHC6 308 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 B4GALNT2Q8NHY0 566 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 NEIL3Q8TAT5 605 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 SH3GL1Q99961 368 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 HOPXQ9BPY8 73 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 OR2B2Q9GZK3 357 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 MED17Q9NVC6 651 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 DNAJB12Q9NXW2 375 aaKnown RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 CALML5Q9NZT1 146 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 ABCD2Q9UBJ2 740 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 SUCOQ9UBS9 1254 aaKnown RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 SH3BGRL2Q9UJC5 107 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 TINAGQ9UJW2 476 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 DKKL1Q9UK85 242 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF443Q9Y2A4 671 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-201ENST00000309641 PCNX1Q96RV3 2341 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 A0A1B0GVC2 190 aa8.24□□□□□ -1.09
PDE4D-201ENST00000309641 CDHR4A6H8M9 788 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms