RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SCGB2A1O75556 95 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 PKLRP30613 574 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 TCEAL1Q15170 157 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 STEAP3Q658P3 488 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 STEAP4Q687X5 459 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 ADAM19Q9H013 955 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 C8orf33Q9H7E9 229 aaPredicted RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 DDX31Q9H8H2 851 aaKnown RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 VRTNQ9H8Y1 702 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 HRH3Q9Y5N1 445 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 CLDN6P56747 220 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 GAB1Q13480 694 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 KIAA0141Q14154 515 aaPredicted RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 ARL6IP1Q15041 203 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 TCTE1Q5JU00 501 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 HACD4Q5VWC8 232 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 OR4C11Q6IEV9 310 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF852Q6ZMS4 543 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 SULF2Q8IWU5 870 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 DCAF4L2Q8NA75 395 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 SMAP2Q8WU79 429 aaPredicted RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 SUSD3Q96L08 255 aa14.02□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF587Q96SQ5 575 aaPredicted RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 C19orf25Q9UFG5 118 aaPredicted RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 PURGQ9UJV8 347 aaKnown RBP14.02□□□□□ -0.16
SCN3B-201ENST00000299333 I6L893 689 aaPredicted RBP14.02□□□□□ -0.17
SCN3B-201ENST00000299333 ACTL6BO94805 426 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
SCN3B-201ENST00000299333 SLC9A3R2Q15599 337 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 CREB3L4Q8TEY5 395 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 HRASLS2Q9NWW9 162 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 NPAP1Q9NZP6 1156 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 RIMS1Q86UR5 1692 aaKnown RBP14.02□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF487B1APH4 448 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 RDH16O75452 317 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 GALTP07902 379 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 NME2P22392 152 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 RBMS1P29558 406 aaKnown RBP14.02□□□□□ -0.17
SCN3B-201ENST00000299333 SLC30A7Q8NEW0 376 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 DCAF13Q9NV06 445 aaKnown RBP14.02□□□□□ -0.17
SCN3B-201ENST00000299333 USP36Q9P275 1121 aaKnown RBP14.02□□□□□ -0.17
SCN3B-201ENST00000299333 V9GY05 133 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 PLIN4Q96Q06 1357 aa14.02□□□□□ -0.17
SCN3B-201ENST00000299333 SHMT2P34897 504 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 CST9LP1Q5W188 147 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 TPGS2Q68CL5 300 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 MCATQ8IVS2 390 aaKnown RBP14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SDR9C7Q8NEX9 313 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 PXT1Q8NFP0 134 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 GGHQ92820 318 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 C4orf36Q96KX1 117 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 MRI1Q9BV20 369 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 RIMS3Q9UJD0 308 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 ITGAMP11215 1152 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 HOXD13P35453 343 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 BDH1Q02338 343 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 RAB40BQ12829 278 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SMN1Q16637 294 aaKnown RBP14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SLC25A31Q9H0C2 315 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 C5AR2Q9P296 337 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SERTAD3Q9UJW9 196 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SDC3O75056 442 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 KLK3P07288 261 aaPredicted RBP14.01□□□□□ -0.17
SCN3B-201ENST00000299333 MAKP20794 623 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 RAB35Q15286 201 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 CGB2Q6NT52 195 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 TRAPPC6BQ86SZ2 158 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 LAX1Q8IWV1 398 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF300Q96RE9 604 aaPredicted RBP14.01□□□□□ -0.17
SCN3B-201ENST00000299333 NICN1Q9BSH3 213 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SDR39U1Q9NRG7 319 aaPredicted RBP14.01□□□□□ -0.17
SCN3B-201ENST00000299333 DRD2P14416 443 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 GABRR1P24046 479 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 ISCA2Q86U28 154 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 TMEM200AQ86VY9 491 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 SNX18Q96RF0 628 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 HIPK2Q9H2X6 1198 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 IGSF5Q9NSI5 407 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 KLHL13Q9P2N7 655 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 MRC1P22897 1456 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 WASH4PA8MWX3 477 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 MRPS34P82930 218 aaKnown RBP14.01□□□□□ -0.17
SCN3B-201ENST00000299333 LMX1AQ8TE12 382 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 LRRC46Q96FV0 321 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 PTTG3PQ9NZH4 202 aa14.01□□□□□ -0.17
SCN3B-201ENST00000299333 C2orf78A6NCI8 922 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 CLDN24A6NM45 220 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 IL1AP01583 271 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 TFAP2AP05549 437 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 ARSDP51689 593 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 TAS2R19P59542 299 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 EBPQ15125 230 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 MAMDC2Q7Z304 686 aaPredicted RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 OR56B4Q8NH76 319 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 SETD7Q8WTS6 366 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 C14orf79Q96F83 325 aa14□□□□□ -0.17
SCN3B-201ENST00000299333 TRMT2BQ96GJ1 504 aaKnown RBP14□□□□□ -0.17
SCN3B-201ENST00000299333 SEC22AQ96IW7 307 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms