RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HMBOX1Q6NT76 420 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM150AQ86TG1 271 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 PELI3Q8N2H9 469 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 GGHQ92820 318 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 CDC6Q99741 560 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ICKQ9UPZ9 632 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 CACNG2Q9Y698 323 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 TRAV18A0A075B6X5 111 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 GJB3O75712 270 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 RBMS1P29558 406 aaKnown RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 CLDN2P57739 230 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 TNFRSF17Q02223 184 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 PDE7AQ13946 482 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 OR1Q1Q15612 314 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF761Q86XN6 746 aaPredicted RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 RTP3Q9BQQ7 232 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 OLAHQ9NV23 265 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 BABAM2Q9NXR7 383 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ABRACLQ9P1F3 81 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 HCFC2Q9Y5Z7 792 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 CACNG3O60359 315 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 UGT2B7P16662 529 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 CSNK2A1P68400 391 aaPredicted RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 FAM78AQ5JUQ0 283 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SBSNQ6UWP8 590 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF578Q96N58 590 aaPredicted RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF583Q96ND8 569 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 OR51E2Q9H255 320 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 IL20RAQ9UHF4 553 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SC5DO75845 299 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF806P0C7X5 589 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 POU3F4P49335 361 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SELPLGQ14242 412 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 C5orf46Q6UWT4 87 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 RETREG3Q86VR2 466 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 VN1R2Q8NFZ6 395 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 CNOT9Q92600 299 aaKnown RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 MUL1Q969V5 352 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 DDX31Q9H8H2 851 aaKnown RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 CUEDC1Q9NWM3 386 aaPredicted RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 KCNIP1Q9NZI2 227 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 FAM155AB1AL88 458 aaPredicted RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 SLCO2B1O94956 709 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 IFNA1P01562 189 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 RAB3AP20336 220 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 PBX2P40425 430 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 ACSM3Q53FZ2 586 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SFRP4Q6FHJ7 346 aaPredicted RBP12□□□□□ -0.49
PTCD1-201ENST00000292478 IGFN1Q86VF2 1251 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SLA2Q9H6Q3 261 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 KCNS2Q9ULS6 477 aa12□□□□□ -0.49
PTCD1-201ENST00000292478 SDC3O75056 442 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 AIFM1O95831 613 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 MMP12P39900 470 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 UBE2NP61088 152 aaKnown RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 LRRC37A5PQ49AS3 106 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 ABHD17BQ5VST6 288 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 BEND4Q6ZU67 534 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 TMEM102Q8N9M5 508 aaPredicted RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 OR6Q1Q8NGQ2 317 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SNAPC3Q92966 411 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SMIM14Q96QK8 99 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 PHB2Q99623 299 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 TP53P04637 393 aaPredicted RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SOX3P41225 446 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SGSHP51688 502 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 WDR53Q7Z5U6 358 aaPredicted RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SLC43A2Q8N370 569 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 OR2T11Q8NH01 316 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 A4GALTQ9NPC4 353 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 ITGB4P16144 1822 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 LAMA4Q16363 1823 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 A6NCN8 305 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 H7C2Y5 167 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 LDB3O75112 727 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 FURINP09958 794 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 GIPRP48546 466 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 PSPHP78330 225 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 METAP1DQ6UB28 335 aaPredicted RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 Q6ZSR9 355 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 PHC2Q8IXK0 858 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 CYB561A3Q8NBI2 242 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SDR9C7Q8NEX9 313 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 TM9SF4Q92544 642 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 NAT6Q93015 286 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 TCEAL3Q969E4 200 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 ARRDC3Q96B67 414 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 TAAR2Q9P1P5 351 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 UBE2J1Q9Y385 318 aaPredicted RBP11.99□□□□□ -0.49
PTCD1-201ENST00000292478 SYT5O00445 386 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 GPR39O43194 453 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 GPRIN2O60269 458 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF28P17035 718 aa11.99□□□□□ -0.49
PTCD1-201ENST00000292478 CD38P28907 300 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms