RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CNTNAP3BQ96NU0 1288 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SIRT5Q9NXA8 310 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 FBXL21Q9UKT6 434 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF705GA8MUZ8 300 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 EMC8O43402 210 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF20P17024 532 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ADH6P28332 368 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 HOXC8P31273 242 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 LSSP48449 732 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 VEGFBP49765 207 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CD300CQ08708 224 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CST6Q15828 149 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SPIN3Q5JUX0 258 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SYT6Q5T7P8 510 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 XAF1Q6GPH4 301 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 VRK2Q86Y07 508 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 NRSN1Q8IZ57 195 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 OR4F15Q8NGB8 312 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ARRDC3Q96B67 414 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CSF3RQ99062 836 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TMEFF2Q9UIK5 374 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 AK6Q9Y3D8 172 aaKnown RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF670-ZNF695F2Z2N8 137 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 RFXAPO00287 272 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 EIF1AYO14602 144 aaKnown RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SLCO2B1O94956 709 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SLC6A12P48065 614 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 DEFB110Q30KQ9 67 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TMPRSS9Q7Z410 1059 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 NECAB3Q96P71 396 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TEX51A0A1B0GUA7 166 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 AMY2AP04746 511 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 FBXO45P0C2W1 286 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CBR1P16152 277 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 BMPR1AP36894 532 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CCR2P41597 374 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TPMTP51580 245 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 KIAA1024LP59773 190 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF169Q14929 603 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SSX2Q16385 188 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TMEM31Q5JXX7 168 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 PIP5KL1Q5T9C9 394 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 WDSUB1Q8N9V3 476 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 OR14K1Q8NGZ2 314 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 FANK1Q8TC84 345 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SLC25A44Q96H78 314 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 TMEM5Q9Y2B1 443 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CA5BQ9Y2D0 317 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 BORCS7-ASMTA0A0B4J1R7 106 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 A0A1W2PPL8 197 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 ANTXRLA6NF34 631 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 GFYI3L273 518 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 MAS1P04201 325 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 CLEC2LP0C7M8 214 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 SOX9P48436 509 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 KCNJ10P78508 379 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 EIF4HQ15056 248 aaKnown RBP11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 FCN2Q15485 313 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 NKPD1Q17RQ9 610 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 CHTF18Q8WVB6 975 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 NEURL2Q9BR09 285 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 TIMM8BQ9Y5J9 83 aaPredicted RBP11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 SNX11Q9Y5W9 270 aa11.77□□□□□ -0.52
SLC6A1-201ENST00000287766 OR2A25A4D2G3 310 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 NCR1O76036 304 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 MT-ND4P03905 459 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 GYPBP06028 91 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 SNRNP70P08621 437 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 ITGA5P08648 1049 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 LIPCP11150 499 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 GIPRP48546 466 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 ETV1P50549 477 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 LRIT3Q3SXY7 679 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 LHX8Q68G74 356 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 PAQR6Q6TCH4 344 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 IL20RBQ6UXL0 311 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 UNC5DQ6UXZ4 953 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 USP51Q70EK9 711 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 PDZD3Q86UT5 571 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 NRROSQ86YC3 692 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 MRPL43Q8N983 215 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 OR6N2Q8NGY6 317 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 SLC7A6Q92536 515 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 CLCC1Q96S66 551 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 HRASLS2Q9NWW9 162 aa11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 NDRG4Q9ULP0 352 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-201ENST00000287766 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms