RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HPGDP15428 266 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 STAT5AP42229 794 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 CD226Q15762 336 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 BTBD16Q32M84 506 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 SWT1Q5T5J6 900 aaKnown RBP21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 PLAG1Q6DJT9 500 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 PPP1R32Q7Z5V6 425 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 OR4K5Q8NGD3 323 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 THAP3Q8WTV1 239 aaPredicted RBP21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 PCDHGA6Q9Y5G7 932 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 A0A1W2PQD3 144 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 UGT2B11O75310 529 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 PPM1BO75688 479 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 LYNP07948 512 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 RPS15P62841 145 aaKnown RBP21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 MYBPC1Q00872 1141 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 NPRL3Q12980 569 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 NDUFAF6Q330K2 333 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 KRT80Q6KB66 452 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF613Q6PF04 617 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 NKAIN4Q8IVV8 208 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 PARP8Q8N3A8 854 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 M1APQ8TC57 530 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 GTPBP3Q969Y2 492 aaKnown RBP21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 MUS81Q96NY9 551 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 DGCR6LQ9BY27 220 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 MMP25Q9NPA2 562 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 SLC7A7Q9UM01 511 aa21.02■□□□□ 0.95
SMARCB1-201ENST00000263121 MAGEA13PA6NCF6 341 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 C21orf140B9A014 251 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 WWP2O00308 870 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 RAD1O60671 282 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 CLK3P49761 638 aaKnown RBP21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 DNASE1L3Q13609 305 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 SSPNQ14714 243 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 NDUFAF7Q7L592 441 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF440Q8IYI8 595 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 LSMEM1Q8N8F7 131 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 ACOT11Q8WXI4 607 aaPredicted RBP21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 ARSGQ96EG1 525 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 PRSS27Q9BQR3 290 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 TRIM2Q9C040 744 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 FAM117AQ9C073 453 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 EXOSC3Q9NQT5 275 aaKnown RBP21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 PNPLA3Q9NST1 481 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 MYOTQ9UBF9 498 aa21.01■□□□□ 0.95
SMARCB1-201ENST00000263121 ALG1L2C9J202 215 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 UBL4AP11441 157 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 POU2F1P14859 743 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 NAGAP17050 411 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 EPHA2P29317 976 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 UGT2B15P54855 530 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 LSM11P83369 360 aaKnown RBP eCLIP21■□□□□ 0.95
SMARCB1-201ENST00000263121 SKP2Q13309 424 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 IL18R1Q13478 541 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 KEAP1Q14145 624 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 KLHL17Q6TDP4 642 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 ZER1Q7Z7L7 766 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 MARCH9Q86YJ5 346 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 GATSQ8NAP1 163 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 POGLUT1Q8NBL1 392 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 GPR87Q9BY21 358 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 DEFB126Q9BYW3 111 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 POLR1BQ9H9Y6 1135 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 TMEM27Q9HBJ8 222 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 EXPH5Q8NEV8 1989 aa21■□□□□ 0.95
SMARCB1-201ENST00000263121 A0A0B4J2E0 115 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 A0A1B0GX12 115 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 BCKDKO14874 412 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 FADS1O60427 444 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 NTN1O95631 604 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 GABREP78334 506 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 EFR3AQ14156 821 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF691Q5VV52 312 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 C1orf94Q6P1W5 598 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF730Q6ZMV8 503 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 APLFQ8IW19 511 aaPredicted RBP20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 PHOSPHO1Q8TCT1 267 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 NACC2Q96BF6 587 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 PITX2Q99697 317 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 RTN4RQ9BZR6 473 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 UCK2Q9BZX2 261 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 ZBTB20Q9HC78 741 aaPredicted RBP20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 ENOPH1Q9UHY7 261 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 NDRG4Q9ULP0 352 aaKnown RBP20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 NSG1A0A0A6YYJ2 146 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 H3BNH8 94 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 STMND1H3BQB6 276 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 OIP5O43482 229 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 CELA2AP08217 269 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 F8A1P23610 371 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 DLSTP36957 453 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 LYPD8Q6UX82 237 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 CD300LDQ6UXZ3 194 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 C8orf59Q8N0T1 100 aaPredicted RBP20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 TMEM255BQ8WV15 326 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 REV1Q9UBZ9 1251 aa20.99■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF292O60281 2723 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 A0A1B0GWA3 101 aa20.98■□□□□ 0.95
SMARCB1-201ENST00000263121 ZNF264O43296 627 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms