RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DRD2P14416 443 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 GNB3P16520 340 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 RAB4AP20338 218 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 GALNT1Q10472 559 aaPredicted RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 OR5M10Q6IEU7 315 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 FAM71E2Q8N5Q1 922 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 OR7G1Q8NGA0 311 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 TMEM239Q8WW34 195 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 FOXJ1Q92949 421 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 DMRT3Q9NQL9 472 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 ZNF701M0R085 212 aaPredicted RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 SERPINA7P05543 415 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 FUT1P19526 365 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 CCR6P51684 374 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 ILKQ13418 452 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 CTSL3PQ5NE16 218 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 OLIG3Q7RTU3 272 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 ZNF546Q86UE3 836 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 ENTHD1Q8IYW4 607 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 SETD7Q8WTS6 366 aaKnown RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 ZBTB8AQ96BR9 441 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 SLC38A1Q9H2H9 487 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 NELFAQ9H3P2 528 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 SIX6O95475 246 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 ADH1BP00325 375 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 HLA-AP01891 365 aaKnown RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 SERPINA5P05154 406 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 HMGN2P05204 90 aaKnown RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 SRP9P49458 86 aaKnown RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 RPS21P63220 83 aaKnown RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 PLP2Q04941 152 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 ENTPD8Q5MY95 495 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 TMEM102Q8N9M5 508 aaPredicted RBP11.35□□□□□ -0.59
SMG6-201ENST00000263073 RCBTB1Q8NDN9 531 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 SLC35B4Q969S0 331 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 KLHDC7BQ96G42 594 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 OR5M11Q96RB7 305 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 DNTTIP1Q9H147 329 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 PLEKHJ1Q9NW61 149 aa11.35□□□□□ -0.59
SMG6-201ENST00000263073 TOR1AO14656 332 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 PTGESO14684 152 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 ICMTO60725 284 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 PGCP20142 388 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 EIF4HQ15056 248 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 LRIF1Q5T3J3 769 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 TEPSINQ96N21 525 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 RBM24Q9BX46 236 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 ANKRD12Q6UB98 2062 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 TSPAN11A1L157 253 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 GGT3PA6NGU5 568 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 H7C1C5 153 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 JMJD7P0C870 316 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 APEX1P27695 318 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 CHATP28329 748 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 TGFBR1P36897 503 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 RPS15AP62244 130 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 LCN6P62502 163 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 KDELC1Q6UW63 502 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 HORMAD2Q8N7B1 307 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 SUMF2Q8NBJ7 301 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 THRSPQ92748 146 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 ZNF334Q9HCZ1 680 aaPredicted RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 OLAHQ9NV23 265 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 CITO14578 2027 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 ACOD1A6NK06 481 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 ATP6V1G2-DDX39BF2Z307 99 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 NFKBIEO00221 500 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 PIGAP37287 484 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 CXADRP78310 365 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 BRIX1Q8TDN6 353 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 RRNAD1Q96FB5 475 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 TCEAL2Q9H3H9 227 aaPredicted RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 GORASP2Q9H8Y8 452 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 TXNL4BQ9NX01 149 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 E9PI62 339 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 SHOXO15266 292 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 CDK2P24941 298 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 ELOAQ14241 798 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 TMEFF1Q8IYR6 380 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 OR1S1Q8NH92 325 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 C3orf49Q96BT1 292 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 GCM1Q9NP62 436 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 BACE2Q9Y5Z0 518 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 CDC14CA4D256 554 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 FZD7O75084 574 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 IFNA4P05014 189 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 FAM163BP0C2L3 166 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 NR2C1P13056 603 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 FOSL1P15407 271 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 ERV3-1Q14264 604 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 NSDHLQ15738 373 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 SLC22A6Q4U2R8 563 aa11.34□□□□□ -0.59
SMG6-201ENST00000263073 DVL3Q92997 716 aaPredicted RBP11.34□□□□□ -0.59
SMG6-201ENST00000263073 MROH6A6NGR9 719 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms