RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CD300LFQ8TDQ1 290 aa15.22■□□□□ 0.03
SREBF1-201ENST00000261646 SLC6A7Q99884 636 aa15.22■□□□□ 0.03
SREBF1-201ENST00000261646 MACROD1Q9BQ69 325 aa15.22■□□□□ 0.03
SREBF1-201ENST00000261646 ACOXLQ9NUZ1 547 aa15.22■□□□□ 0.03
SREBF1-201ENST00000261646 TAS2R8Q9NYW2 309 aa15.22■□□□□ 0.03
SREBF1-201ENST00000261646 PRAMEF2O60811 474 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 PFN3P60673 137 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 SORDQ00796 357 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 FGL1Q08830 312 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 CCSMST1Q4G0I0 132 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 ZNF546Q86UE3 836 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 TPRA1Q86W33 373 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 OR5AR1Q8NGP9 310 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 GHSRQ92847 366 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 DNAJA3Q96EY1 480 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 SPACA7Q96KW9 195 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 CERS4Q9HA82 394 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 ABRACLQ9P1F3 81 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 UBR3Q6ZT12 1888 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 C1orf226A1L170 272 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 SDC3O75056 442 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 IMPA1P29218 277 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 MC3RP41968 323 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 TEKQ02763 1124 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 GFOD2Q3B7J2 385 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 ZNF805Q5CZA5 627 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 TEX261Q6UWH6 196 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 RDH10Q8IZV5 341 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 OR2L5Q8NG80 312 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 OR2L2Q8NH16 312 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 SYNPRQ8TBG9 265 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 S100PBPQ96BU1 408 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 ELP4Q96EB1 424 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 PINK1Q9BXM7 581 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 SOHLH2Q9NX45 425 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 U3KQ87 197 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 GKN3PP0CG01 181 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 GIMD1P0DJR0 217 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 TFPIP10646 304 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 LIPCP11150 499 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 CYBAP13498 195 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 CTSEP14091 401 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 S100A2P29034 98 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 MTNR1BP49286 362 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 KCTD20Q7Z5Y7 419 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 NLRP8Q86W28 1048 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 ZNF584Q8IVC4 421 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 FAM26EQ8N5C1 309 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 APH1BQ8WW43 257 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 MAFIPQ8WZ33 124 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 LMF1Q96S06 567 aa15.21■□□□□ 0.03
SREBF1-201ENST00000261646 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.21■□□□□ 0.03
SREBF1-201ENST00000261646 KIF13BQ9NQT8 1826 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM129A0AVI4 362 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 CASC3O15234 703 aaKnown RBP15.21■□□□□ 0.02
SREBF1-201ENST00000261646 GABRB1P18505 474 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 GABRA3P34903 492 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 PRSS3P35030 304 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 PPM1AP35813 382 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 KCNJ5P48544 419 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 POU4F2Q12837 409 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 CDNFQ49AH0 187 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 BTN2A1Q7KYR7 527 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 MEPCEQ7L2J0 689 aaKnown RBP15.21■□□□□ 0.02
SREBF1-201ENST00000261646 SLC9B2Q86UD5 537 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 LILRA3Q8N6C8 439 aaPredicted RBP15.21■□□□□ 0.02
SREBF1-201ENST00000261646 OR10K1Q8NGX5 313 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM106CQ9BVX2 250 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 RAB11FIP5Q9BXF6 653 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 MEMO1Q9Y316 297 aa15.21■□□□□ 0.02
SREBF1-201ENST00000261646 CPEP16870 476 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 CD34P28906 385 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 PER3P56645 1201 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 ZNF169Q14929 603 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-201ENST00000261646 DEFB134Q4QY38 66 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 KRBOX4Q5JUW0 171 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 ARHGAP11AQ6P4F7 1023 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 KLHDC8AQ8IYD2 350 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 DPYSL5Q9BPU6 564 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 HRH3Q9Y5N1 445 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 UNCXA6NJT0 531 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 C1orf196B1AJZ1 125 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 SGCEO43556 437 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 S100A11P31949 105 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 NKPD1Q17RQ9 610 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM205Q6UW68 189 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 SLCO4C1Q6ZQN7 724 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 BPHLQ86WA6 291 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-201ENST00000261646 ABHD4Q8TB40 342 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 AGPAT2O15120 278 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 NPR2P20594 1047 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 DUSP6Q16828 381 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 FAM83HQ6ZRV2 1179 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-201ENST00000261646 NRROSQ86YC3 692 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 LGALS14Q8TCE9 139 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 GAL3ST4Q96RP7 486 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 SLC22A12Q96S37 553 aa15.2■□□□□ 0.02
SREBF1-201ENST00000261646 CMKLR1Q99788 373 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms