RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 HMGB4Q8WW32 186 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 NACC2Q96BF6 587 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 HS6ST2Q96MM7 605 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 CAPN10Q9HC96 672 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 FAM60AQ9NP50 221 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 HS3ST3A1Q9Y663 406 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 USP34Q70CQ2 3546 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 CASKO14936 926 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 IGHV4-34P06331 123 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 EOGTQ5NDL2 527 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 AGAP6Q5VW22 663 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 NIPAL3Q6P499 406 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZCCHC12Q6PEW1 402 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZC3H14Q6PJT7 736 aaKnown RBP18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 THSD4Q6ZMP0 1018 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 ABI3BPQ7Z7G0 1075 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 KLBQ86Z14 1044 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 AGAP4Q96P64 663 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 JAM3Q9BX67 310 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 GABRPO00591 440 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 RDH16O75452 317 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 CBX7O95931 251 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 CSF3P09919 207 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR2B6P58173 313 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 POU6F2P78424 691 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 SRSF5Q13243 272 aaKnown RBP18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 GPR50Q13585 617 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 DEFB110Q30KQ9 67 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 MANEAQ5SRI9 462 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 XKRXQ6PP77 449 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR13C2Q8NGS9 318 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 TIMP4Q99727 224 aa18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 MEPEQ9NQ76 525 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP1-201ENST00000249014 FAM221BA6H8Z2 402 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 C10orf142B7Z368 130 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 DVL2O14641 736 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 CHST10O43529 356 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 RFPL3O75679 317 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 NCR1O76036 304 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 SSTR4P31391 388 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 RFX3P48380 749 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 EIF2B5Q13144 721 aaKnown RBP18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 MARCH9Q86YJ5 346 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 UBQLNLQ8IYU4 475 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 LNX2Q8N448 690 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 DNAJC5GQ8N7S2 189 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR52R1Q8NGF1 315 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR52L1Q8NGH7 329 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 AP3S1Q92572 193 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 BPIFA2Q96DR5 249 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 ABHD8Q96I13 439 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 CD207Q9UJ71 328 aa18.09■□□□□ 0.49
CDC42EP1-201ENST00000249014 CD8B2A6NJW9 211 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 C12orf71A8MTZ7 269 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 FMO6PO60774 539 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 CD8BP10966 210 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 TYRP1P17643 537 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 BMP7P18075 431 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 RABIFP47224 123 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 NKX2-5P52952 324 aaPredicted RBP18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 MEPCEQ7L2J0 689 aaKnown RBP18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 GID4Q8IVV7 300 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR9A4Q8NGU2 314 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 DNAJA4Q8WW22 397 aaPredicted RBP18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 CNOT9Q92600 299 aaKnown RBP18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 KISS1RQ969F8 398 aaPredicted RBP18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 GSDMCQ9BYG8 508 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 RBCK1Q9BYM8 510 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 COMMD3Q9UBI1 195 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 SIGLEC7Q9Y286 467 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 KNL1Q8NG31 2342 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 BRWD1Q9NSI6 2320 aa18.08■□□□□ 0.49
CDC42EP1-201ENST00000249014 C2orf92A0A1B0GVN3 265 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 POLR1CO15160 346 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMCC2O75069 709 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 ADAM11O75078 769 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 HLA-DPB1P04440 258 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 ST6GAL1P15907 406 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 LTBRP36941 435 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 HTR3AP46098 478 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 PRPF38BQ5VTL8 546 aaKnown RBP18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 GARNL3Q5VVW2 1013 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMEM91Q6ZNR0 172 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMPRSS11FQ6ZWK6 438 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMEM99Q8N816 258 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 ATP6V1C2Q8NEY4 427 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 NEIL3Q8TAT5 605 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 GRHL3Q8TE85 626 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 PTP4A1Q93096 173 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 TBX5Q99593 518 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 CCDC3Q9BQI4 270 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 HOXD1Q9GZZ0 328 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 FN3KQ9H479 309 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 WDR70Q9NW82 654 aa18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 SIRT4Q9Y6E7 314 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP1-201ENST00000249014 TRAV27A0A087WT01 109 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 NKX2-2O95096 273 aa18.07■□□□□ 0.48
CDC42EP1-201ENST00000249014 AK1P00568 194 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms