RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 REG4Q9BYZ8 158 aa12.4□□□□□ -0.43
DDX39A-201ENST00000242776 MYNNQ9NPC7 610 aa12.4□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF701Q9NV72 531 aaPredicted RBP12.4□□□□□ -0.43
DDX39A-201ENST00000242776 AIG1Q9NVV5 245 aa12.4□□□□□ -0.43
DDX39A-201ENST00000242776 CFL2Q9Y281 166 aa12.4□□□□□ -0.43
DDX39A-201ENST00000242776 HS3ST1O14792 307 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 PHF1O43189 567 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-201ENST00000242776 CCDC22O60826 627 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 DCTN3O75935 186 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 CGAP01215 116 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 PEPDP12955 493 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 HK1P19367 917 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 HPCAL1P37235 193 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 CDKN1AP38936 164 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 CLDN15P56746 228 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 CORO7P57737 925 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 STX5Q13190 355 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 SQLEQ14534 574 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 PON3Q15166 354 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 PDCD4Q53EL6 469 aaKnown RBP12.39□□□□□ -0.43
DDX39A-201ENST00000242776 TMEM81Q6P7N7 255 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 MIER2Q8N344 545 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 CCDC197Q8NCU1 140 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 C16orf78Q8WTQ4 265 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 EFHD2Q96C19 240 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-201ENST00000242776 KLHL29Q96CT2 875 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 TSSK3Q96PN8 268 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 DSN1Q9H410 356 aa12.39□□□□□ -0.43
DDX39A-201ENST00000242776 ACOX3O15254 700 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 EMC8O43402 210 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 G6PDP11413 515 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 IL12BP29460 328 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 KRT20P35900 424 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 ACVR1BP36896 505 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 CLNS1AP54105 237 aaKnown RBP12.38□□□□□ -0.43
DDX39A-201ENST00000242776 CLDN20P56880 219 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 MAP4K2Q12851 820 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 R3HCC1LQ7Z5L2 792 aaKnown RBP12.38□□□□□ -0.43
DDX39A-201ENST00000242776 ZBTB18Q99592 522 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 DPY30Q9C005 99 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 MIEF1Q9NQG6 463 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 MED11Q9P086 117 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 PPP4R1LQ9P1A2 415 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF337Q9Y3M9 751 aa12.38□□□□□ -0.43
DDX39A-201ENST00000242776 C1orf226A1L170 272 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 FRG2CA6NGY1 282 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 ABCB7O75027 752 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 SOX30O94993 753 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 IL3P08700 152 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 PRPS1L1P21108 318 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 DRD5P21918 477 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 PPICP45877 212 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 MRPL19P49406 292 aaKnown RBP12.37□□□□□ -0.43
DDX39A-201ENST00000242776 EMDP50402 254 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 RPS4XP62701 263 aaKnown RBP12.37□□□□□ -0.43
DDX39A-201ENST00000242776 C2orf80Q0P641 193 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 FAPQ12884 760 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 SGCBQ16585 318 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 SLC48A1Q6P1K1 146 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 HIPK1Q86Z02 1210 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF611Q8N823 705 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 CLHC1Q8NHS4 586 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 KAT2AQ92830 837 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 NEUROG1Q92886 237 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
DDX39A-201ENST00000242776 TM4SF18Q96CE8 201 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 MTERF3Q96E29 417 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 ZBED6CLQ96FA7 236 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-201ENST00000242776 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
DDX39A-201ENST00000242776 PRRG4Q9BZD6 226 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 ZIM2Q9NZV7 527 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 ZNF639Q9UID6 485 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 PCDHA9Q9Y5H5 950 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 GPR45Q9Y5Y3 372 aa12.37□□□□□ -0.43
DDX39A-201ENST00000242776 OR6C70A6NIJ9 312 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 HAX1O00165 279 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CLOCKO15516 846 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 AQP8O94778 261 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CD8BP10966 210 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 PAX1P15863 534 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CSNK2A2P19784 350 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 DDCP20711 480 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 DSCR4P56555 118 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CLDN8P56748 225 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 SRSF2Q01130 221 aaKnown RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 PTGR1Q14914 329 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 BCL2A1Q16548 175 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CTU2Q2VPK5 515 aaKnown RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 CHRFAM7AQ494W8 412 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 FAM71E1Q6IPT2 247 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 GLB1L3Q8NCI6 653 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 OR4N2Q8NGD1 307 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 FOLH1BQ9HBA9 442 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 SDR39U1Q9NRG7 319 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-201ENST00000242776 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
DDX39A-201ENST00000242776 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms