RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 SLC5A12Q1EHB4 618 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 SPIN4Q56A73 249 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 ZNF789Q5FWF6 425 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 ARSJQ5FYB0 599 aaPredicted RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 TBC1D3GQ6DHY5 549 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 ABLIM2Q6H8Q1 611 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 ULK3Q6PHR2 472 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 AHSA2Q719I0 299 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 THOC6Q86W42 341 aaKnown RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 STK40Q8N2I9 435 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 OR1N1Q8NGS0 311 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 SH3RF2Q8TEC5 729 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 CHTF18Q8WVB6 975 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 CNOT9Q92600 299 aaKnown RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 MR1Q95460 341 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 FCRL2Q96LA5 508 aaPredicted RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 TEAD3Q99594 435 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 SEPT5Q99719 369 aaPredicted RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 C7orf50Q9BRJ6 194 aaKnown RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 AARSD1Q9BTE6 412 aaKnown RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 FICDQ9BVA6 458 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 RIBC2Q9H4K1 309 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 TUBA4BQ9H853 241 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 EXOSC3Q9NQT5 275 aaKnown RBP5.34□□□□□ -1.55
RFX4-201ENST00000229387 SMCO4Q9NRQ5 59 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 KCTD3Q9Y597 815 aa5.34□□□□□ -1.55
RFX4-201ENST00000229387 LOXHD1Q8IVV2 1947 aa5.34□□□□□ -1.56
RFX4-201ENST00000229387 A0A087WV62 115 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 A0A1W2PPE3 182 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 LRIT2A6NDA9 550 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 TMEM200CA6NKL6 621 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 GPR89AB7ZAQ6 455 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 C9JVG2 144 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 J3KR12 359 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 TP53I11O14683 189 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 GGCTO75223 188 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 OR4F21O95013 312 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 SERPINA1P01009 418 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 GPR89BP0CG08 455 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 SELPP16109 830 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 PGAM1P18669 254 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 GPX3P22352 226 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 S100A2P29034 98 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 VAMP2P63027 116 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 PPP3R1P63098 170 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 TWF1Q12792 350 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 UPP1Q16831 310 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 RPS26P11Q5JNZ5 115 aaPredicted RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 OR4F3Q6IEY1 312 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 LHFPL4Q7Z7J7 247 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 FAM185AQ8N0U4 392 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 CHST14Q8NCH0 376 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 CCDC54Q8NEL0 328 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 KLHDC9Q8NEP7 349 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 SEPHS2Q99611 448 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 TXN2Q99757 166 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 SEC11CQ9BY50 192 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ACE2Q9BYF1 805 aaPredicted RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 SLC39A8Q9C0K1 460 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 FBRSL1Q9HCM7 1045 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 SLC6A20Q9NP91 592 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 RBM22Q9NW64 420 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFX4-201ENST00000229387 RNF186Q9NXI6 227 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 BTRCQ9Y297 605 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 H7C417 338 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 GFYI3L273 518 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 GTPBP1O00178 669 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 HAS3O00219 553 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 RFXAPO00287 272 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ATP6AP2O75787 350 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 MATN4O95460 622 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 CLTBP09497 229 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ALDOCP09972 364 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 PRSS56P0CW18 603 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 BRCA1P38398 1863 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 GRK6P43250 576 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 MRPL19P49406 292 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 PPT1P50897 306 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 VSX2P58304 361 aaPredicted RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 PNLIPRP3Q17RR3 467 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 BCL2L15Q5TBC7 163 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ZNF385CQ66K41 422 aaPredicted RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 ALKAL2Q6UX46 152 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 C17orf99Q6UX52 265 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 RNF165Q6ZSG1 346 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ANKRD33Q7Z3H0 272 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 KCNMB4Q86W47 210 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 OR4C15Q8NGM1 316 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 OR2T35Q8NGX2 323 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ACOT12Q8WYK0 555 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 TMEM203Q969S6 136 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 CMTM7Q96FZ5 175 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 NSUN5Q96P11 429 aaKnown RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 PIGQQ9BRB3 760 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 PCGF1Q9BSM1 259 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ALG8Q9BVK2 526 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 OR52A5Q9H2C5 316 aa5.33□□□□□ -1.56
RFX4-201ENST00000229387 ACSS1Q9NUB1 689 aaPredicted RBP5.33□□□□□ -1.56
RFX4-201ENST00000229387 GAR1Q9NY12 217 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms