RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MED17Q9NVC6 651 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 ZNF337Q9Y3M9 751 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 DOCK7Q96N67 2140 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 INTS1Q8N201 2190 aaKnown RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 A0A0G2JNJ9 132 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 SERINC4A6NH21 518 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 PRSS44E7EML9 344 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 H0Y3Z8 333 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 H0YC42 278 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 H3BML4 177 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 H3BNH8 94 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 CLIC1O00299 241 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 BCAS1O75363 584 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 CYP7B1O75881 506 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 TOXO94900 526 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 EPPINO95925 133 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 HOXD4P09016 255 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 NUDT7P0C024 238 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 NR2F1P10589 423 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 CPN1P15169 458 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 POU3F2P20265 443 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 AGAP20933 346 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 MSX1P28360 303 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 ZNF41P51814 821 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 TPD52P55327 224 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 CLDN18P56856 261 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 HPCAP84074 193 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 MAPK11Q15759 364 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 TOMM34Q15785 309 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 ZNF630Q2M218 657 aaPredicted RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 TMEM44Q2T9K0 475 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 PLPPR5Q32ZL2 321 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 MED12LQ86YW9 2145 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 UBQLNLQ8IYU4 475 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 ZNF619Q8N2I2 560 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 TNIP2Q8NFZ5 429 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 SMPDL3BQ92485 455 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 ZNF524Q96C55 264 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 TRNT1Q96Q11 434 aaKnown RBP11.46□□□□□ -0.57
LSM5-201ENST00000223084 UCK2Q9BZX2 261 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 SAP130Q9H0E3 1048 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 SLC38A1Q9H2H9 487 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 RABEP2Q9H5N1 569 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 POLE3Q9NRF9 147 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 TMEM45AQ9NWC5 275 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 COQ3Q9NZJ6 369 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 VAPAQ9P0L0 249 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 Q9UFV3 132 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 ICAM5Q9UMF0 924 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 L3MBTL1Q9Y468 752 aa11.46□□□□□ -0.57
LSM5-201ENST00000223084 A0A1W2PP18 115 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 CLDN24A6NM45 220 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 FAM90A27PA6NNH2 459 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 ZNF264O43296 627 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 SEC14L5O43304 696 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 CLDN14O95500 239 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 NUDT14O95848 222 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 CSTAP01040 98 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 OPN1LWP04000 364 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 UBL4AP11441 157 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 ZNF708P17019 499 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 HTR1EP28566 365 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 PTGER4P35408 488 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 P2RX1P51575 399 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 SUCLG1P53597 346 aaKnown RBP11.45□□□□□ -0.58
LSM5-201ENST00000223084 GYS2P54840 703 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 CLDN15P56746 228 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 DSTNP60981 165 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
LSM5-201ENST00000223084 TXNL4AP83876 142 aaKnown RBP11.45□□□□□ -0.58
LSM5-201ENST00000223084 ART3Q13508 389 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 RGNQ15493 299 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 GLYR1Q49A26 553 aaPredicted RBP11.45□□□□□ -0.58
LSM5-201ENST00000223084 LRIF1Q5T3J3 769 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 METTL21CQ5VZV1 264 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 NSUN5P2Q63ZY6 315 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 RETREG3Q86VR2 466 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 LIX1LQ8IVB5 337 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 C10orf111Q8N326 155 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 TMCO5AQ8N6Q1 288 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 NAXEQ8NCW5 288 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 POC1BQ8TC44 478 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 GPR119Q8TDV5 335 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 PIGQQ9BRB3 760 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 HHATLQ9HCP6 504 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 KLHL14Q9P2G3 628 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 LIPT1Q9Y234 373 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 PKDREJQ9NTG1 2253 aa11.45□□□□□ -0.58
LSM5-201ENST00000223084 ANKRD17O75179 2603 aaKnown RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 A0A087WZY1 265 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 TRBV5-3A0A0A0MS03 114 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 NKX2-6A6NCS4 301 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 CLCA1A8K7I4 914 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 FAM47E-STBD1D6RA91 191 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 C19orf84I3L1E1 186 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 EIF4E2O60573 245 aaKnown RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 BCHEP06276 602 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms