RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 CrymO54983 313 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nr4a1P12813 601 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Il5raP21183 415 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Foxa3P35584 353 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rab3cP62823 227 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 UbdP63072 162 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 SlbpP97440 275 aaKnown RBP8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 UqcrhP99028 89 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ptpn2Q06180 406 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm7489Q3UT34 171 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Obox3Q3UT54 335 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 FdxrQ61578 494 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nox3Q672J9 568 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 H2-M2Q6W9L1 343 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Krr1Q8BGA5 380 aaKnown RBP8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 FtoQ8BGW1 502 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rspry1Q8BVR6 576 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ttc34Q8C0Q3 554 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc45a3Q8K0H7 553 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Neto1Q8R4I7 533 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fmo4Q8VHG0 560 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Eif2b2Q99LD9 351 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tm4sf20Q9CQY8 226 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hnrnpa0Q9CX86 305 aaKnown RBP8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cmtm6Q9CZ69 183 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Dcaf6Q9DC22 876 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prss22Q9ER10 306 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 C1galt1c1Q9JMG2 316 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Adgrf5G5E8Q8 1348 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Trbv12-2A0A0B4J1H1 124 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tcrg-V5A0A0G2JGV5 113 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm45213A0A0U1RNZ6 101 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1320A2AHM8 319 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm14147A2AQX6 640 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm438B1ASB3 393 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm5093E9PZB3 174 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm21887J3QQ04 176 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1513L7N457 313 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 KlO35082 1014 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc28a2O88627 660 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Treml4Q3LRV9 263 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tpgs2Q66JT5 296 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kcnip4Q6PHZ8 250 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Calm5Q6W3E0 140 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ntf4Q80VU4 209 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gpr180Q8BPS4 441 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 IfnzQ8BQT1 182 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 PaoxQ8C0L6 504 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Q8C0X8 640 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Trim9Q8C7M3 817 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm13278Q8CD73 182 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r62Q8R2C0 300 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tsen15Q8R3W5 168 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc6a8Q8VBW1 640 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rwdd3Q8VIL2 267 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tbrg4Q91YM4 630 aaKnown RBP8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Me2Q99KE1 589 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kat8Q9D1P2 458 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ccdc124Q9D8X2 217 aaKnown RBP8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Chrac1Q9JKP8 129 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Dbf4Q9QZ41 663 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Minpp1Q9Z2L6 481 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cacna1fQ9JIS7 1985 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tsc2Q61037 1814 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zfp109A0A0U1RPC5 652 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1130A0A1L1SQT2 314 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Lcn5A2AJB7 192 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ndufaf5A2APY7 343 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1023A2ASU6 311 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Spata31d1cE9QAF1 853 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kbtbd2G3X9X1 623 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Scgb2a2J3KMP9 96 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 OmdO35103 423 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 NelfeP19426 375 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pax4P32115 349 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tnfrsf4P47741 272 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tango2P54797 276 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mdga2P60755 949 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 EsrrgP62509 458 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cpeb1P70166 561 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 F7P70375 446 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ctdnep1Q3TP92 244 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zfp953Q3UPV7 304 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vwa5b2Q3UR50 1248 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zfp658Q5PPQ4 887 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gstt2Q61133 244 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fgfr3Q61851 801 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 St8sia1Q64687 355 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr787Q7TRI1 312 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tm9sf4Q8BH24 643 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fam126bQ8C729 530 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Wdr24Q8CFJ9 790 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc16a14Q8K1C7 512 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cma2Q91VB1 246 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc27a4Q91VE0 643 aaKnown RBP8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gpx6Q91WR8 221 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 GlyatQ91XE0 296 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vwa5aQ99KC8 793 aaKnown RBP8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hspa12bQ9CZJ2 685 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Acsl3Q9CZW4 720 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms