RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Zcchc4Q8BKW4 512 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MaobQ8BW75 520 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Armcx6Q8K3A6 301 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1461Q8VEV7 312 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tmem30cQ9D4D7 342 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Serinc3Q9QZI9 472 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc22a28B2RT89 552 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm6401L7N2C0 213 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MagP20917 626 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pcsk2P21661 637 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Etv4P28322 485 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cd300lgQ1ERP8 331 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Atf7ip2Q3UL97 452 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mtcp1Q60945 107 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 ManealQ6P1J0 452 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Frg2f1Q6P3A2 227 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mfsd13aQ6PDE8 519 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hs6st2Q80UW0 612 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Baiap2Q8BKX1 535 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Bnc2Q8BMQ3 1127 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mrpl48Q8JZS9 211 aaKnown RBP11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Nmral1Q8K2T1 309 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc22a30Q96LX3 552 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Eif2b2Q99LD9 351 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 AspdhQ9DCQ2 287 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn1r90A0A087WR36 309 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rhox2cA2AWL9 191 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 ChrndP02716 520 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P06336 421 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tmprss9P69525 1065 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Sorbs2Q3UTJ2 1180 aaKnown RBP11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gcnt7Q3V3K7 433 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Arhgef15Q5FWH6 849 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr270Q7TS19 314 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MyotQ9JIF9 496 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Adam28Q9JLN6 793 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MthfrQ9WU20 654 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zfp873A0A1B0GT64 667 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 P01673 111 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ntf3P20181 258 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fbxo34Q80XI1 695 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rhbdd3Q8BP97 385 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gpr157Q8C206 330 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Q8R3Y5 413 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Grk5Q8VEB1 590 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 SdhbQ9CQA3 282 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pinx1Q9CZX5 332 aaKnown RBP11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Upk3bl1Q9D701 249 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Xpr1Q9Z0U0 695 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm15155B1B034 138 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gsg1lD3Z7H4 322 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn2r105E9Q3A5 860 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn2r56E9Q4U5 779 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm5798F7BTS7 198 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gpx5P21765 221 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vipr2P41588 437 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hsd11b2P51661 386 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Defb43Q30KM9 69 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Serpinf2Q61247 491 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 EdnraQ61614 427 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cr1lQ64735 483 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Trim46Q7TNM2 759 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zar1Q80SU3 361 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cml2Q8CHQ9 238 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Chchd4Q8VEA4 139 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn1r40Q9EQ46 310 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Trim39Q9ESN2 488 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 ClpxQ9JHS4 634 aaKnown RBP11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Bco1Q9JJS6 566 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1555-ps1A0A140LHT7 321 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hoxd12P23812 268 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 PitpnaP53810 271 aaKnown RBP11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mmp7Q10738 264 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ltbp3Q61810 1268 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 SpicQ6P3D7 242 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Adgrg7Q8BM96 785 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rtn4rl1Q8K0S5 445 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Paip1Q8VE62 400 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr164Q8VF87 315 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc2a10Q8VHD6 536 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Arhgef3Q91X46 524 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hm13Q9D8V0 378 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Arl6ip1Q9JKW0 203 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Prl3c1Q9QUN5 212 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 A0A1Y7VIT9 351 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1076A2AK60 313 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm8973D3YX71 104 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm7714E9Q079 131 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm340F6RGI3 1242 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hoxa9P09631 271 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Osbp2Q5QNQ6 908 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 PfplQ5RKV8 702 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mylk4Q5SUV5 386 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Adamtsl4Q80T21 1036 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 As3mtQ91WU5 376 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Steap1Q9CWR7 339 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 4930451I11RikE9Q9R3 111 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Best1O88870 551 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 D11Wsu47eQ6PIX9 558 aa11.14□□□□□ -0.63
Pcif1-201ENSMUST00000041643 H1fntQ8CJI4 398 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms