RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Vmn1r229Q8R2A9 306 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Q8R3C1 574 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Crtac1Q8R555 646 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gbgt1Q8VI38 347 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tmem269Q9D4Y8 254 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Rnf138rt1Q9D9M9 248 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cts6Q9ET52 334 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cnot9Q9JKY0 299 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Sult1b1Q9QWG7 299 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 N4bp2F8VQG7 1678 aaKnown RBP9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Catsperg1E9Q355 1151 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm8888J3QPX5 126 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Il13ra1O09030 424 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Irf2P23906 349 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 CckbrP56481 453 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cry1P97784 606 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Emx1Q04742 257 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr503Q7TRU8 323 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Otop1Q80VM9 600 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fem1abQ8C0T1 654 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Mfsd1Q9DC37 464 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Rad9aQ9Z0F6 389 aa9.31□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cela3aA2A9U8 283 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn1r68E9Q0V3 319 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Zfp871G5E905 615 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r109K7N747 858 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 En1P09065 401 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 LpoQ5SW46 710 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Klhl9Q6ZPT1 617 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr776Q7TRI3 312 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fbxw13Q8BI57 466 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Q8BZE1 841 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Kcnmb1Q8CAE3 191 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Wdr37Q8CBE3 496 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr811Q8VFI1 319 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tbc1d20Q9D9I4 402 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cyp4v2Q9DBW0 525 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr948Q9EQ95 321 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Bex3Q9WTZ9 124 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1315-ps1A0A140LI66 314 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r30K7N5W1 852 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r47K7N709 852 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Capns1O88456 269 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 NelfeP19426 375 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 RpiaP47968 303 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 CrxosQ3UL53 246 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tmem253Q3UNB8 204 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Enpp3Q6DYE8 874 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Unc5dQ8K1S2 956 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr518Q8VEW1 333 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1316Q8VG12 314 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cdhr1Q8VHP6 859 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tram2Q924Z5 370 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc25a27Q9D6D0 322 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Prss52Q9D9M0 321 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tsc22d4Q9EQN3 387 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 RhcgQ9QXP0 498 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r75G5E8Z7 853 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm2035J3QP87 144 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Nat3P50296 290 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Neurog1P70660 244 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Ccbe1Q3MI99 408 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Spire1Q52KF3 598 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Irgm1Q60766 409 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc35a1Q61420 336 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Krt33bQ61897 404 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Zp1Q62005 623 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Clec9aQ8BRU4 238 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Ctdsp2Q8BX07 270 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Neu4Q8BZL1 478 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gipc3Q8R5M0 297 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr799Q8VGI7 311 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc41a3Q921R8 488 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 CsprsQ99388 208 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Lactb2Q99KR3 288 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Sema4gQ9WUH7 837 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tcrg-C4A0A075B6C7 190 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Zfp993A2A8V4 313 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Ttll2A4Q9E4 540 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Rnaset2aC0HKG5 259 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Rnaset2bC0HKG6 259 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Csn2P10598 231 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 TpoP35419 914 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 ActbP60710 375 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Actg1P63260 375 aaKnown RBP9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Mtf1Q07243 675 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tmub2Q3V209 319 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr714Q7TRN0 317 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gpr18Q8K1Z6 331 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Dbf4Q9QZ41 663 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Eif4hQ9WUK2 248 aaKnown RBP9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm45716A0A1B0GRQ0 93 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm8225D3Z536 292 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r45L7N2B5 852 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 LcatP16301 438 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Hoxc5P32043 222 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Chrm4P32211 479 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 RoraP51448 523 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cpne2P59108 548 aa9.3□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc9a3r1P70441 355 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms