RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Nxpe3B9EKK6 559 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Scgb2b3D2XZ38 112 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vmn1r20K7N778 303 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Sypl1O09117 261 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pdlim1O70400 327 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Irf1P15314 329 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr629Q0VBH3 314 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gm853Q3UNZ2 425 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vwa5b2Q3UR50 1248 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 MertkQ60805 994 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr598Q7TRR2 319 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Enkd1Q7TSV9 346 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Slc35c1Q8BLX4 363 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 MmaaQ8C7H1 415 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 C1raQ8CG16 707 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Tmed4Q8R1V4 227 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 SvbpQ99LQ4 66 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Adam21Q9JI76 729 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Insm2Q9JMC2 493 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Col4a5Q63ZW6 1691 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 PvrigA0A1B0GS01 234 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 CatsperbA2RTF1 1109 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Mthfd2lD3YZG8 338 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ptrhd1D3Z4S3 140 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr730E9Q8M3 318 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Cldn34aG3UW52 211 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc10a1O08705 362 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Igfbp1P47876 272 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Snap91Q61548 901 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tgoln1Q62313 353 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Amer3Q6NS69 780 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ankrd9Q8BH83 326 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Pars2Q8CFI5 475 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc22a6Q8VC69 545 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr215Q8VF82 310 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fmo4Q8VHG0 560 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 MsraQ9D6Y7 233 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Dpysl5Q9EQF6 564 aa10.65□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Pramef6A2A8M8 474 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Spata6lB2RV46 347 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 PitpnaP53810 271 aaKnown RBP10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Bcl2a1Q07440 172 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fbxl19Q6PB97 674 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1219Q7TR04 311 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr70Q80ZX9 316 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Poldip3Q8BG81 420 aaKnown RBP10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Pex12Q8VC48 359 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Hyal3Q8VEI3 412 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Elovl4Q9EQC4 312 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Adat1Q9JHI2 499 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Brwd3A2AHJ4 1799 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ndufaf6A2AIL4 333 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Xlr4aA2BI40 215 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Vmn2r109K7N747 858 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Syn1O88935 706 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Sult2a2P50236 285 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fut7Q11131 389 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tmprss11bQ14C59 416 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Trim63Q38HM4 350 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Xlr4cQ3TKR2 215 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ffar3Q3UFD7 319 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Taar8aQ5QD07 344 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Bod1Q5SQY2 173 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Foxd3Q61060 465 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Acat3Q80X81 397 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 WacQ924H7 646 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gtpbp8Q9CY28 285 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Mrps33Q9D2R8 106 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Xlr4bQ9JJQ7 215 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gdf2Q9WV56 428 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr634-ps1A0A1B0GRN7 318 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Zfp993A2A8V4 313 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ppp1r3dA2AJW4 279 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm13285B1AYI3 182 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm13275B1AYI8 182 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Zfp994J3QM38 661 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 5730507C01RikJ3QPX0 416 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 TtlP38585 377 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Igfbp3P47878 292 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 SnrpgP62309 76 aaKnown RBP10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 DtymkP97930 212 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Irf4Q64287 450 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Polr2mQ6P6I6 366 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc26a11Q80ZD3 593 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Flrt2Q8BLU0 660 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 IfnzQ8BQT1 182 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm13278Q8CD73 182 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Lgi4Q8K1S1 537 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Cables2Q8K3M5 476 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gdpd1Q9CRY7 314 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Bud23Q9CY21 281 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Six6Q9QZ28 246 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 TrioQ0KL02 3102 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 SisF8VQM5 1818 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1034A0A1L1ST14 310 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm13178B1AVU7 408 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc22a28B2RT89 552 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 BC049352E9Q2Z6 85 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 St8sia2O35696 375 aa10.64□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Dsc1P55849 886 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms