RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 MazP56671 477 aaKnown RBP15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 PdxpP60487 292 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mtf1Q07243 675 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cd47Q61735 303 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 SypQ62277 314 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pik3ip1Q7TMJ8 264 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Lrrc75bQ7TPD7 306 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1045Q7TR80 315 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 McubQ810S1 345 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc9a7Q8BLV3 726 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc5a8Q8BYF6 611 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ttc23Q8CHY7 488 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Chrna3Q8R4G9 499 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr599Q8VG01 315 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1316Q8VG12 314 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ankrd10Q99LW0 415 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Orc5Q9WUV0 435 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Zfp981A2A8V7 445 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Hs3st4D3YVV6 449 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr746E9Q840 314 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cyp4a31F8WGU9 509 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Aldh3b3J3QMK6 479 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r102L7N279 857 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nfatc1O88942 717 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mtnd2P03893 345 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tcf3P15806 651 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 VclQ64727 1066 aaKnown RBP15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Clba1Q8BHN9 321 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Klhl31Q8BWA5 634 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fbxl8Q8CIG9 374 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 BphlQ8R164 291 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn1r83Q8R287 306 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr202Q8VGQ3 307 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Med27Q9DB40 311 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nusap1Q9ERH4 427 aaKnown RBP15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Abcb10Q9JI39 715 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 ProdhQ9WU79 599 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Celsr3Q91ZI0 3301 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tmem156A0A1D5RLR8 321 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tmem200cJ3QK46 637 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cx3cl1O35188 395 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gstm6O35660 218 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mab21l1O70299 359 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rln1P47932 185 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 TsxP70675 144 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 TefmQ5SSK3 364 aaKnown RBP15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ffar1Q76JU9 300 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 SelenoiQ80TA1 398 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Q8CF31 99 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Spns1Q8R0G7 528 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc26a5Q99NH7 744 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ap3s1Q9DCR2 193 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Khdrbs2Q9WU01 349 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cldn6Q9Z262 219 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 1700028J19RikA0A0U1RP08 172 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Glb1l3A2RSQ1 649 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Scarb2O35114 478 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 P01675 107 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 P01676 107 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 P01677 107 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 P01678 107 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nid1P10493 1245 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 AcadmP45952 421 aaKnown RBP15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 SnrpgP62309 76 aaKnown RBP15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 AmbpQ07456 349 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Treml4Q3LRV9 263 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mfsd2bQ3T9M1 494 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm10750Q3V0I0 133 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 MertkQ60805 994 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Eif1aQ60872 144 aaKnown RBP15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 ManeaQ6NXH2 462 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fbxl19Q6PB97 674 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 B430306N03RikQ6QX36 289 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr728Q7TRM6 311 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Kctd7Q8BJK1 289 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc26a9Q8BU91 790 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ugt2a3Q8BWQ1 534 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr108Q8VFA1 320 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Wdr6Q99ME2 1125 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 CenpnQ9CZW2 337 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cndp2Q9D1A2 475 aaKnown RBP15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Prss52Q9D9M0 321 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Zfhx2Q2MHN3 2562 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Lilra6A0A0B4J1F3 663 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Bhlhe40O35185 411 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Timp2P25785 220 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gabra3P26049 492 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gch1Q05915 241 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 ShhQ62226 437 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 PrlhrQ6VMN6 370 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gen1Q8BMI4 908 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Grk5Q8VEB1 590 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tspan1Q99J59 240 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Lingo1Q9D1T0 614 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pmepa1Q9D7R2 260 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tmem43Q9DBS1 400 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr938Q9EQ93 315 aa15.19■□□□□ 0.02
Trim28-201ENSMUST00000005705 Bod1lE9Q6J5 3032 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 F8Q06194 2319 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nmur1O55040 428 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms