RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SLC25A3Q00325 362 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 LIPEQ05469 1076 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 FUT5Q11128 374 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TRAP1Q12931 704 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 KCNAB2Q13303 367 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TUBA3CQ13748 450 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TRIM25Q14258 630 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 FGFBP1Q14512 234 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ADRM1Q16186 407 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ZSCAN26Q16670 478 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 HYAL4Q2M3T9 481 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 COX20Q5RI15 118 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SLC22A10Q63ZE4 541 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TUBA3EQ6PEY2 450 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 DHRS4L2Q6PKH6 230 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 FRRS1Q6ZNA5 592 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ASRGL1Q7L266 308 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ZZZ3Q8IYH5 903 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 C10orf67Q8IYJ2 551 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SIRT6Q8N6T7 355 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 PSD4Q8NDX1 1056 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 PNPT1Q8TCS8 783 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SLC38A5Q8WUX1 472 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 WDR60Q8WVS4 1066 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 LZICQ8WZA0 190 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 NR4A3Q92570 626 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 UTP4Q969X6 686 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 NTNG2Q96CW9 530 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SCMH1Q96GD3 660 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TMEM41AQ96HV5 264 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF597Q96LX8 424 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 C5orf34Q96MH7 638 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 RAB3IPQ96QF0 476 aaPredicted RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 UBL7Q96S82 380 aaPredicted RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TREX2Q9BQ50 279 aaPredicted RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 FAM173AQ9BQD7 235 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SLC39A3Q9BRY0 314 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 OSBPL11Q9BXB4 747 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ANGPTL4Q9BY76 406 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TBL1XR1Q9BZK7 514 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 POLR2J2Q9GZM3 115 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 POLR2J3Q9H1A7 115 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 C7orf69Q9H7B7 122 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ANKRA2Q9H9E1 313 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 OLAHQ9NV23 265 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ADPRHL2Q9NX46 363 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 CMTM6Q9NX76 183 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 KLHL28Q9NXS3 571 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ACTR3BQ9P1U1 418 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 LRFN1Q9P244 771 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 RPS6KA6Q9UK32 745 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 BAG5Q9UL15 447 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 BOKQ9UMX3 212 aaPredicted RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SAMD4AQ9UPU9 718 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 DTNAQ9Y4J8 743 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 WIF1Q9Y5W5 379 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SNX13Q9Y5W8 968 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 AKAP13Q12802 2813 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ACACBO00763 2458 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 EML6Q6ZMW3 1958 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 CFAP73A6NFT4 308 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 KLRC4-KLRK1H3BQV0 150 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 ACOT7O00154 380 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 FADS1O60427 444 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 UGT2B11O75310 529 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 UGT2B17O75795 530 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 NEURL1O76050 574 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 OR6B1O95007 311 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 UTS2O95399 124 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 WDPCPO95876 746 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 CHRM4P08173 479 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 CELA2AP08217 269 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 PABPC4LP0CB38 370 aaKnown RBP6.15□□□□□ -1.42
UPF3B-205ENST00000636792 CYP4B1P13584 511 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 CD1EP15812 388 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 IL7RP16871 459 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 GGT1P19440 569 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 KDELR2P33947 212 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 CASP3P42574 277 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 SLC6A8P48029 635 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 MAP2K6P52564 334 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 NCALDP61601 193 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 OC90Q02509 493 aaPredicted RBP6.15□□□□□ -1.42
UPF3B-205ENST00000636792 C17orf67Q0P5P2 114 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 SELPLGQ14242 412 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 GK3PQ14409 553 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF169Q14929 603 aaPredicted RBP6.15□□□□□ -1.42
UPF3B-205ENST00000636792 OR1C1Q15619 314 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 NNATQ16517 81 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 ST3GAL2Q16842 350 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 KLHL26Q53HC5 615 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 TYW3Q6IPR3 259 aaKnown RBP6.15□□□□□ -1.42
UPF3B-205ENST00000636792 LCN8Q6JVE9 175 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 SLC25A25Q6KCM7 469 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 PGM2L1Q6PCE3 622 aa6.15□□□□□ -1.42
UPF3B-205ENST00000636792 IL20RBQ6UXL0 311 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms