RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SAMD8Q96LT4 415 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 ZFP3Q96NJ6 502 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 TIMP4Q99727 224 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 C1QTNF2Q9BXJ5 285 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 QRSL1Q9H0R6 528 aaKnown RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 OR52A5Q9H2C5 316 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 MED9Q9NWA0 146 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 COQ3Q9NZJ6 369 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 AKAP7Q9P0M2 348 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 POMT2Q9UKY4 750 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 PLAGL1Q9UM63 463 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 CHST2Q9Y4C5 530 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 MTCL1Q9Y4B5 1905 aaKnown RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 TRAV1-2A0A0B4J238 106 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 hCG_1807616A0A1W2PRN6 198 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 GSAPA4D1B5 854 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 SLC22A31A6NKX4 558 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 MAN2B1O00754 1011 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 HYAL3O43820 417 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 SC5DO75845 299 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 CFDP00746 253 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 SERPINA3P01011 423 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 IL32P24001 234 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 TRHRP34981 398 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 AHRP35869 848 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 SSR2P43308 183 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 VSX2P58304 361 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 DGCR2P98153 550 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 KLF9Q13886 244 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 GRIN2CQ14957 1233 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 ZNF765Q7L2R6 523 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 UBE3DQ7Z6J8 389 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 VRK2Q86Y07 508 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 TMEM99Q8N816 258 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 BEST4Q8NFU0 473 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 OR52L1Q8NGH7 329 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 OR5AR1Q8NGP9 310 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 SLC41A3Q96GZ6 507 aa13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 FBXO9Q9UK97 447 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-220ENST00000635988 A0A1W2PQ45 241 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 A0A1W2PQY0 241 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 FAM183AA6NL82 134 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 FRS3O43559 492 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 CLEC3AO75596 197 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 SYPP08247 313 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 GPR1P46091 355 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 BLVRAP53004 296 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 CRYZQ08257 329 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 OPCMLQ14982 345 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 MAPK14Q16539 360 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 FAM27D1Q5T7N8 215 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 NLRC3Q7RTR2 1065 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 GDF7Q7Z4P5 450 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 KIAA0907Q7Z7F0 614 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 ZNF547Q8IVP9 402 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 VN1R2Q8NFZ6 395 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 OR10H4Q8NGA5 316 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 CMTM3Q96MX0 182 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 OR7D2Q96RA2 312 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 MCHR1Q99705 422 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 C20orf85Q9H1P6 137 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 METTL17Q9H7H0 456 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 ZC4H2Q9NQZ6 224 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 HCN3Q9P1Z3 774 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 GLS2Q9UI32 602 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 MRPS7Q9Y2R9 242 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 GPR55Q9Y2T6 319 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 TSPAN4O14817 238 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 OR1F1O43749 312 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 IFNA16P05015 189 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 ZP1P60852 638 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 TSPAN5P62079 268 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 SLC3A1Q07837 685 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 SLC25A35Q3KQZ1 300 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 TMEM35AQ53FP2 167 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 ACSM3Q53FZ2 586 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 FAM98AQ8NCA5 519 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 SMIM4Q8WVI0 70 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 SORCS1Q8WY21 1168 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 TFGQ92734 400 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 KLK6Q92876 244 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 TBX5Q99593 518 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 RPS6KB2Q9UBS0 482 aa13.8□□□□□ -0.2
CACNA1A-220ENST00000635988 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 H7BY64 318 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 EMC8O43402 210 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 VEGFDO43915 354 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 PAPLNO95428 1278 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 MT-ND4P03905 459 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 ACSM4P0C7M7 580 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 NRG3P56975 720 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 DHODHQ02127 395 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 RPL6Q02878 288 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 SLC9A5Q14940 896 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 ZSWIM7Q19AV6 140 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms