RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 HMGN1P05114 100 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ITGB7P26010 798 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 EIF2DP41214 584 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ZNF33BQ06732 778 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ATXN7L3Q14CW9 347 aaPredicted RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 C10orf62Q5T681 223 aaPredicted RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 IKBIPQ70UQ0 350 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 GJD3Q8N144 294 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 SFXN2Q96NB2 322 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 CDCA3Q99618 268 aaPredicted RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 PITX2Q99697 317 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ANKRA2Q9H9E1 313 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 WBP1LQ9NX94 342 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 LAMP5Q9UJQ1 280 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 OSGIN1Q9UJX0 560 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 YARS2Q9Y2Z4 477 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 PLXNA4Q9HCM2 1894 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 AGAP5A6NIR3 686 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 AGAP14A8MT82 685 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 GREM1O60565 184 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 HMGN2P05204 90 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 CDK1P06493 297 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 APEHP13798 732 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 S100GP29377 79 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 CSNK1DP48730 415 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 TUBA1BP68363 451 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 EEF1A2Q05639 463 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 E2F2Q14209 437 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ZNF385BQ569K4 471 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ALG10BQ5I7T1 473 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 TUBA1AQ71U36 451 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 SPRED2Q7Z698 418 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 LYSMD2Q8IV50 215 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 ACOT4Q8N9L9 421 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 OR8S1Q8NH09 359 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 PDXPQ96GD0 296 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 OR4K3Q96R72 315 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 LYSMD1Q96S90 227 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 NUDT22Q9BRQ3 303 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 QRSL1Q9H0R6 528 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 SMOC1Q9H4F8 434 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 CD93Q9NPY3 652 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 C14orf119Q9NWQ9 140 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 LYARQ9NX58 379 aaKnown RBP7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 CNIH4Q9P003 139 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 PRODH2Q9UF12 536 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 POFUT2Q9Y2G5 429 aa7.77□□□□□ -1.17
PTPDC1-204ENST00000620992 MKI67P46013 3256 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 OR2W5A6NFC9 320 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 FABP12A6NFH5 140 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 EIF3FO00303 357 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 CHST10O43529 356 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 CSF2P04141 144 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 ZNF806P0C7X5 589 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 GSTT2P0CG29 244 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 GSTT2BP0CG30 244 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 PRPH2P23942 346 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 GRK5P34947 590 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 PCGF2P35227 344 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 HOXD12P35452 270 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 DSG2Q14126 1118 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 KCNJ8Q15842 424 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 ZNF630Q2M218 657 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 GRHL2Q6ISB3 625 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 VHLLQ6RSH7 139 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 CCL4L1Q8NHW4 92 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 ABHD5Q8WTS1 349 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 UFD1Q92890 307 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 FGF14Q92915 247 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 INSM2Q96T92 566 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 C6orf106Q9H6K1 298 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 IL21Q9HBE4 155 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 FGF21Q9NSA1 209 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 KLHL42Q9P2K6 505 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 SLC6A14Q9UN76 642 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 DNMT3AQ9Y6K1 912 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 DOCK6Q96HP0 2047 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 METTL15A6NJ78 407 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 FARS2O95363 451 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 GYPBP06028 91 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 UQCRC1P31930 480 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 SMSP52788 366 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 CRYBA2P53672 197 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 CLRN1P58418 232 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 RBM39Q14498 530 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 TBCEQ15813 527 aaPredicted RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 UBE2UQ5VVX9 321 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 B3GLCTQ6Y288 498 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 CDH24Q86UP0 819 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 B3GNT7Q8NFL0 401 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 OR5B2Q96R09 309 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 SECISBP2Q96T21 854 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 NXF5Q9H1B4 397 aaKnown RBP7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 TRPV5Q9NQA5 729 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 SAGE2PA6NJ88 616 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 IMPA1P29218 277 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 ZP2Q05996 745 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 FADDQ13158 208 aa7.76□□□□□ -1.17
PTPDC1-204ENST00000620992 KCNAB1Q14722 419 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms