RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SENP5Q96HI0 755 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SLC45A3Q96JT2 553 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 LMF2Q9BU23 707 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 KLHL13Q9P2N7 655 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 BORCS7-ASMTA0A0B4J1R7 106 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SDC1P18827 310 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 AHRP35869 848 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 OR1D5P58170 312 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PIN1Q13526 163 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF791Q3KP31 576 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 UBE2UQ5VVX9 321 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 WBP2NLQ6ICG8 309 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 OR5H2Q8NGV7 314 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ZMYND19Q96E35 227 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 TUBA1CQ9BQE3 449 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ACPTQ9BZG2 426 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 FAM118AQ9NWS6 357 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 HS3ST2Q9Y278 367 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SLC6A5Q9Y345 797 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PENKP01210 267 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 LSSP48449 732 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 CCNJQ5T5M9 372 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PRAMEF20Q5VT98 475 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 OR13H1Q8NG92 308 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF431Q8TF32 576 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 NXF5Q9H1B4 397 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PTBP2Q9UKA9 531 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 CASC3O15234 703 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 GPR75O95800 540 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 RAB3AP20336 220 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 LCN1P31025 176 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ERVK-25P63136 954 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 MAB21L1Q13394 359 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 UGT2A3Q6UWM9 527 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ADAMTSL4Q6UY14 1074 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 C12orf43Q96C57 262 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PBX4Q9BYU1 374 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 UBQLN4Q9NRR5 601 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 TREX1Q9NSU2 369 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 MAN2C1Q9NTJ4 1040 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 GPR83Q9NYM4 423 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 NXT1Q9UKK6 140 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 EMC9Q9Y3B6 208 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 BTAF1O14981 1849 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 GABRR3A8MPY1 467 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SLC43A1O75387 559 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 AKR1C4P17516 323 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ERVK-16P61578 105 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SELENOWP63302 87 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SPHARQ15513 63 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SMAD2Q15796 467 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 MMP21Q8N119 569 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 CYB561A3Q8NBI2 242 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 OR9Q2Q8NGE9 314 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 GRPEL2Q8TAA5 225 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ZFPM2Q8WW38 1151 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 NUDT22Q9BRQ3 303 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 KLHL9Q9P2J3 617 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 B3GALT1Q9Y5Z6 326 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PCDH17O14917 1159 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 NARSO43776 548 aaKnown RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 IFNA2P01563 188 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 CTHP32929 405 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 CNN3Q15417 329 aaKnown RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 TP53I3Q53FA7 332 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 PIGGQ5H8A4 983 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF704Q6ZNC4 412 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 STOML3Q8TAV4 291 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 SLC22A12Q96S37 553 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 SLC6A16Q9GZN6 736 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 VSX1Q9NZR4 365 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 MRPL15Q9P015 296 aaKnown RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 CNR2P34972 360 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 PCBD1P61457 104 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 TAZQ16635 292 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 C6orf141Q5SZD1 244 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 ANKRD33Q7Z3H0 272 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 OR5J2Q8NH18 312 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 COQ8AQ8NI60 647 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 TBC1D15Q8TC07 691 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 SLC2A12Q8TD20 617 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 RRNAD1Q96FB5 475 aaKnown RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 NTMT1Q9BV86 223 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF223Q9UK11 482 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 MEN1O00255 615 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 GALR3O60755 368 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 IGHG1P01857 330 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 PRDX1Q06830 199 aaKnown RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.68□□□□□ -0.7
CLIP1-219ENST00000620786 HES5Q5TA89 166 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 LMNTD1Q8N9Z9 388 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 TMEM178AQ8NBL3 297 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 ARRDC2Q8TBH0 407 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 IFI44Q8TCB0 444 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 ASB11Q8WXH4 323 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 SLC39A13Q96H72 371 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 SYT4Q9H2B2 425 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 HS3ST3A1Q9Y663 406 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 C17orf113A0A1B0GUU1 675 aa10.68□□□□□ -0.7
CLIP1-219ENST00000620786 EEF1E1-BLOC1S5C9J1V9 151 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms