RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 C7orf66A4D0T2 115 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 ANTXRLA6NF34 631 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 SOCS6O14544 535 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 RLN1P04808 185 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 AHRP35869 848 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 LIMS1P48059 325 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 OR4D9Q8NGE8 314 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 ADAMTS14Q8WXS8 1223 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 TREX2Q9BQ50 279 aaPredicted RBP12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 DPH7Q9BTV6 452 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 EDARQ9UNE0 448 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 EXOSC1Q9Y3B2 195 aaKnown RBP12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
PCDHA11-202ENST00000616325 TRABD2BA6NFA1 517 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 WASH3PC4AMC7 463 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 KHDRBS3O75525 346 aaKnown RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 POP7O75817 140 aaKnown RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 C1orf105O95561 183 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 RECKO95980 971 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 NMBP08949 121 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 GNSP15586 552 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 FGF9P31371 208 aaPredicted RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 GPR4P46093 362 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 NTHL1P78549 312 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 WNT2BQ93097 391 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 WDR26Q9H7D7 661 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 TMEM138Q9NPI0 162 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 RPS6KB2Q9UBS0 482 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 F5P12259 2224 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 TRAV20A0A0B4J274 112 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 MFSD2BA6NFX1 497 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 J3QLW9 94 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 C8AP07357 584 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF19P17023 458 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 ANXA7P20073 488 aaKnown RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 RAD52P43351 418 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 TAS2R41P59536 307 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 SFXN4Q6P4A7 337 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 COMTD1Q86VU5 262 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PAQR7Q86WK9 346 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF433Q8N7K0 673 aaPredicted RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PLA2G15Q8NCC3 412 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 OR6T1Q8NGN1 323 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 BBS4Q96RK4 519 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 ERVK-19Q9WJR5 959 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 GREM1O60565 184 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 RP2O75695 350 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 SLCO2B1O94956 709 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 SOX30O94993 753 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PRPH2P23942 346 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 TMEM201Q5SNT2 666 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 PRAMEF13Q5VWM6 474 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 CDC73Q6P1J9 531 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 OAFQ86UD1 273 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 CCDC116Q8IYX3 515 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF707Q96C28 371 aaPredicted RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 ORAI1Q96D31 301 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 LDAHQ9H6V9 325 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 CA10Q9NS85 328 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 OR10H1Q9Y4A9 318 aa12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 SIRT4Q9Y6E7 314 aaPredicted RBP12.53□□□□□ -0.4
PCDHA11-202ENST00000616325 A0A1W2PS29 197 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 TMEM129A0AVI4 362 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 CHST10O43529 356 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 EFCAB14O75071 495 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 OR5F1O95221 314 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 ZNF806P0C7X5 589 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 SULT1A3P0DMM9 295 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 SULT1A4P0DMN0 295 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 SSR2P43308 183 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 PYHIN1Q6K0P9 492 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 CLRN3Q8NCR9 226 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 OR52B4Q8NGK2 314 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 REG4Q9BYZ8 158 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 TMEM168Q9H0V1 697 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 C20orf85Q9H1P6 137 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 IL21Q9HBE4 155 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 ACTR10Q9NZ32 417 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 PRELID3BQ9Y3B1 194 aa12.52□□□□□ -0.4
PCDHA11-202ENST00000616325 SCN8AQ9UQD0 1980 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 PLPP1O14494 284 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 RB1P06400 928 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 CTSLP07711 333 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 CLDN2P57739 230 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 IRF5Q13568 498 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 SLC36A2Q495M3 483 aa12.52□□□□□ -0.41
PCDHA11-202ENST00000616325 TMEM215Q68D42 235 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms