RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MFSD12Q6NUT3 480 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 STAC2Q6ZMT1 411 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 C10orf107Q8IVU9 208 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 OR6Y1Q8NGX8 325 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 OR2V1Q8NHB1 315 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 POC1BQ8TC44 478 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 IQCGQ9H095 443 aaKnown RBP18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 TMEM185BQ9H7F4 350 aa18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 ACSS1Q9NUB1 689 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC3-208ENST00000616074 A0A0J9YW62 118 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 TRIM64A6NGJ6 449 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 TRIM64BA6NI03 449 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 SMAD7O15105 426 aaKnown RBP18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 ADAMDEC1O15204 470 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 SYNGR4O95473 234 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 LINC00032P0C843 101 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 NEFHP12036 1026 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 PPP3CBP16298 524 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZNF41P51814 821 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 PCLAFQ15004 111 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 CD226Q15762 336 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 BEX5Q5H9J7 111 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 EXOSC6Q5RKV6 272 aaKnown RBP18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 CCNJQ5T5M9 372 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 CPTPQ5TA50 214 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 KANK2Q63ZY3 851 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 RNF165Q6ZSG1 346 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 ESPNLQ6ZVH7 1005 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 C4orf33Q8N1A6 199 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 COX18Q8N8Q8 333 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 KIF18AQ8NI77 898 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 ACTRT2Q8TDY3 377 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 GATA5Q9BWX5 397 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 HHATLQ9HCP6 504 aa18.58■□□□□ 0.56
TRAPPC3-208ENST00000616074 TLN2Q9Y4G6 2542 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 PRR14LQ5THK1 2151 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 KIF2AO00139 706 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 LSM1O15116 133 aaKnown RBP18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 ALOX5P09917 674 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 HPGDP15428 266 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 KRT4P19013 534 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 PTH2RP49190 550 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 GALNTL6Q49A17 601 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZNF704Q6ZNC4 412 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 TDRPQ86YL5 185 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 EPS8L3Q8TE67 593 aaKnown RBP18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 UBLCP1Q8WVY7 318 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 IGFBPL1Q8WX77 278 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 JADE3Q92613 823 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 FAM120BQ96EK7 910 aaKnown RBP18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 BDH2Q9BUT1 245 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 GSX2Q9BZM3 304 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 UBQLN4Q9NRR5 601 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 TMED5Q9Y3A6 229 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 DNAJC15Q9Y5T4 150 aa18.57■□□□□ 0.56
TRAPPC3-208ENST00000616074 A0A1W2PQD3 144 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 SCDO00767 359 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 PLAUP00749 431 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 AGTR1P30556 359 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 LCN1P31025 176 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 PRIM2P49643 509 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 HBMQ6B0K9 141 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZCCHC12Q6PEW1 402 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 PLEKHM3Q6ZWE6 761 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 MISPQ8IVT2 679 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 LRRN4CLQ8ND94 238 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 B4GALNT2Q8NHY0 566 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 NUDT8Q8WV74 236 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 ACTR6Q9GZN1 396 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 C12orf49Q9H741 205 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 GLRX2Q9NS18 164 aa18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 SIRT3Q9NTG7 399 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC3-208ENST00000616074 TMEM233B4DJY2 109 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 CHEK2O96017 543 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 LINGO3P0C6S8 592 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 BCKDHAP12694 445 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 ME2P23368 584 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 SHC1P29353 583 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 ASMTP46597 345 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 SERPINB4P48594 390 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 POU6F2P78424 691 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 PDSS1Q5T2R2 415 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 BEND4Q6ZU67 534 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 TRABD2AQ86V40 505 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 WFDC8Q8IUA0 241 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 CDS1Q92903 461 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 MTERF3Q96E29 417 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 PLPPR2Q96GM1 343 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 KLHL15Q96M94 604 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 TRMOQ9BU70 441 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZCCHC3Q9NUD5 404 aaKnown RBP18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 MID2Q9UJV3 735 aa18.55■□□□□ 0.56
TRAPPC3-208ENST00000616074 TRIM13O60858 407 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 HMGN2P05204 90 aaKnown RBP18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 TUBBP07437 444 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 CHRNGP07510 517 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 SFTPDP35247 375 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 NR1H2P55055 460 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 ZNF117Q03924 483 aa18.54■□□□□ 0.56
TRAPPC3-208ENST00000616074 FOXF1Q12946 379 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms