RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 AP1G1O43747 822 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 IFNA6P05013 189 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 GPX2P18283 190 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 TAS2R43P59537 309 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 DPTQ07507 201 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 KLHL26Q53HC5 615 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 SLC48A1Q6P1K1 146 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 TANKQ92844 425 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 THSD1Q9NS62 852 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 PCDHGB6Q9Y5F9 930 aa8.35□□□□□ -1.07
PDLIM5-222ENST00000615540 PTPRFP10586 1907 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 GXYLT2A0PJZ3 443 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 C9J4A7 227 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SOCS6O14544 535 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 MYF5P13349 255 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 EPHA2P29317 976 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 BSGP35613 385 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 LIPAP38571 399 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 HSF2Q03933 536 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 EEF1A2Q05639 463 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 GDF7Q7Z4P5 450 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 AMER3Q8N944 861 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 RFT1Q96AA3 541 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 NANSQ9NR45 359 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SDHAF3Q9NRP4 125 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ACSS1Q9NUB1 689 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ADAM29Q9UKF5 820 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 TMPRSS11EQ9UL52 423 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PLCL2Q9UPR0 1127 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 RPH3AQ9Y2J0 694 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 LRRC37A2A6NM11 1700 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FUOMA2VDF0 154 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 CLDN24A6NM45 220 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 H3BML4 177 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PPM1DO15297 605 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PLRG1O43660 514 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 CTHP32929 405 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 GP2P55259 537 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FRMPD2BQ6IN97 320 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ZNF613Q6PF04 617 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 CCBE1Q6UXH8 406 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PAMR1Q6UXH9 720 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 KIR3DX1Q9H7L2 352 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 AGAP5A6NIR3 686 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 OLFM2O95897 454 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 BMP4P12644 408 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FOSL2P15408 326 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 OR1D5P58170 312 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 AP3S2P59780 193 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SGCBQ16585 318 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SOWAHCQ53LP3 525 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 OLFML2AQ68BL7 652 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 MSRB3Q8IXL7 192 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 LAS2Q8IYD9 372 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ARMC10Q8N2F6 343 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FBXL6Q8N531 539 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ZBTB8BQ8NAP8 495 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 METTL2AQ96IZ6 378 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 BTBD2Q9BX70 525 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SGPP1Q9BX95 441 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 DPAGT1Q9H3H5 408 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SLC22A31A6NKX4 558 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SLC2A10O95528 541 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 UBL4AP11441 157 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 FUT1P19526 365 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 NKX3-2P78367 333 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PLGLB1Q02325 96 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PGGHGQ32M88 737 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ADPRMQ3LIE5 342 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 LIN54Q6MZP7 749 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ARL14Q8N4G2 192 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 TRMT10AQ8TBZ6 339 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 GAB3Q8WWW8 586 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 RLFQ13129 1914 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SEC14L2O76054 403 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ALG10Q5BKT4 473 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 RPL13AP3Q6NVV1 102 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PGBD2Q6P3X8 592 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 PLXDC1Q8IUK5 500 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 MCEMP1Q8IX19 187 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SYT14Q8NB59 555 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 SMAP2Q8WU79 429 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 TNFAIP8L1Q8WVP5 186 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 DUS3LQ96G46 650 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 ADOQ96SZ5 270 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 MAP3K3Q99759 626 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 CMKLR1Q99788 373 aa8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 GPN2Q9H9Y4 310 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-222ENST00000615540 OR2W5A6NFC9 320 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 NARSO43776 548 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms