RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 LGI1O95970 557 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 GPIP06744 558 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 FESP07332 822 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 THBS1P07996 1170 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ICAM2P13598 275 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PRG2P13727 222 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 NID1P14543 1247 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ATP6V1C1P21283 382 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ITGA3P26006 1051 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 IL12BP29460 328 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PTGDSP41222 190 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 MAGEA2P43356 314 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 CD97P48960 835 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PNLIPRP2P54317 469 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 GAS1P54826 345 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 SOX8P57073 446 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 AIMP2Q13155 320 aaKnown RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 RAPSNQ13702 412 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ELOAQ14241 798 aaKnown RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 FGFBP1Q14512 234 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 RCN1Q15293 331 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 IGFBP7Q16270 282 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 NTRK2Q16620 822 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 IFI44LQ53G44 452 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 KLHL26Q53HC5 615 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF311Q5JNZ3 666 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 FBXW10Q5XX13 1052 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF227Q86WZ6 799 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 CARM1Q86X55 608 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 KRT73Q86Y46 540 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PEX5LQ8IYB4 626 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 TAGAPQ8N103 731 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 BEST3Q8N1M1 668 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF614Q8N883 585 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 GOLM1Q8NBJ4 401 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 POGLUT1Q8NBL1 392 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 OR10G3Q8NGC4 313 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 OR5M3Q8NGP4 307 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 VANGL1Q8TAA9 524 aaPredicted RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 SLC22A8Q8TCC7 542 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 GRHL3Q8TE85 626 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 CNOT9Q92600 299 aaKnown RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 MIB2Q96AX9 1013 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF524Q96C55 264 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 NTNG2Q96CW9 530 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 FER1L6-AS2Q96M78 137 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 SMAD5Q99717 465 aaKnown RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ARHGDIGQ99819 225 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PKP2Q99959 881 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 DOHHQ9BU89 302 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 G6PC3Q9BUM1 346 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PRR14Q9BWN1 585 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 PINK1Q9BXM7 581 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 AMBRA1Q9C0C7 1298 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 LHPPQ9H008 270 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 MAGIXQ9H6Y5 334 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ATP13A2Q9NQ11 1180 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 RLIMQ9NVW2 624 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ADPRHL2Q9NX46 363 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 DNAJB12Q9NXW2 375 aaKnown RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 VNN3Q9NY84 501 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 RPS6KA6Q9UK32 745 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 ABCG2Q9UNQ0 655 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 SAMD4AQ9UPU9 718 aaKnown RBP7.36□□□□□ -1.23
PCDH9-205ENST00000614931 AURKCQ9UQB9 309 aa7.36□□□□□ -1.23
PCDH9-205ENST00000614931 MED12Q93074 2177 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CLEC18AA5D8T8 446 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 C2orf72A6NCS6 295 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SERINC4A6NH21 518 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 OR6C70A6NIJ9 312 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 A6NL46 340 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SYT5O00445 386 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 AP3D1O14617 1153 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SCO2O43819 266 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SERPINB7O75635 380 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 PRSS23O95084 383 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ATP6V1G2O95670 118 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 F10P00742 488 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 DBIP07108 87 aaKnown RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 NGFRP08138 427 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 GKN3PP0CG01 181 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CCL3P10147 92 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 UMPSP11172 480 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 TBXA2RP21731 343 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 HTR2AP28223 471 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 PRKAR1BP31321 381 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 KRT20P35900 424 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 YAP1P46937 504 aaKnown RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 SSR4P51571 173 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ZNF136P52737 540 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 MLLT10P55197 1068 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 NRG3P56975 720 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 HOXC5Q00444 222 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 CHRNB3Q05901 458 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 RIPK1Q13546 671 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 NADK2Q4G0N4 442 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 LIN52Q52LA3 116 aa7.35□□□□□ -1.23
PCDH9-205ENST00000614931 FAM98BQ52LJ0 330 aaKnown RBP7.35□□□□□ -1.23
PCDH9-205ENST00000614931 ACER2Q5QJU3 275 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms