RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KDM4EB2RXH2 506 aaPredicted RBP12.62□□□□□ -0.39
NEK3-205ENST00000610828 HRO43593 1189 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 SLC2A10O95528 541 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 IFI30P13284 250 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 MAOAP21397 527 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 SOX6P35712 828 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 PGDP52209 483 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 GAS1P54826 345 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 HNRNPKP61978 463 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■■■□ 21.8
NEK3-205ENST00000610828 PLAURQ03405 335 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 ZNF267Q14586 743 aaPredicted RBP12.62□□□□□ -0.39
NEK3-205ENST00000610828 C3orf38Q5JPI3 329 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 NKAIN2Q5VXU1 208 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 GRHL3Q8TE85 626 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CNOT9Q92600 299 aaKnown RBP12.62□□□□□ -0.39
NEK3-205ENST00000610828 PMM1Q92871 262 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 NDUFB11Q9NX14 153 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 DAPK2Q9UIK4 370 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 FBXL21Q9UKT6 434 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 PLCL2Q9UPR0 1127 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 SPAG17Q6Q759 2223 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 IRGMA1A4Y4 181 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 SYNDIG1LA6NDD5 238 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 TLCD2A6NGC4 264 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 UNC119BA6NIH7 251 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 FMO6PO60774 539 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 S100A5P33763 92 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 RAB15P59190 212 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 IFITM3Q01628 133 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 NNATQ16517 81 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 OR2G6Q5TZ20 316 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 RNF113BQ8IZP6 322 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 HOXB13Q92826 284 aaPredicted RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 RFKQ969G6 155 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 CD180Q99467 661 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 LMF2Q9BU23 707 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 OR52D1Q9H346 318 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 MRPS18AQ9NVS2 196 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 SIDT1Q9NXL6 827 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 CFL2Q9Y281 166 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 A3GALT2U3KPV4 340 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 TRIOBPQ9H2D6 2365 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 PNMA8CA0A1B0GUJ8 204 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 LMO7DNF2Z398 122 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 CBFA2T3O75081 653 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 SOX30O94993 753 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 IGKV1D-16P01601 117 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 MAKP20794 623 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 CSNK1EP49674 416 aaKnown RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 WNT4P56705 351 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 TRIM16LQ309B1 348 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 NIPAL1Q6NVV3 410 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 PHC2Q8IXK0 858 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 FANK1Q8TC84 345 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 VSTM2LQ96N03 204 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 PTCHD1Q96NR3 888 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 UBQLN3Q9H347 655 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 TBCCD1Q9NVR7 557 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 UCKL1Q9NWZ5 548 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 SEC14L4Q9UDX3 406 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 ZNF223Q9UK11 482 aaPredicted RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 STUB1Q9UNE7 303 aa12.61□□□□□ -0.39
NEK3-205ENST00000610828 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 SPIN1Q9Y657 262 aaPredicted RBP12.61□□□□□ -0.39
NEK3-205ENST00000610828 RHPN2P1A8MT19 583 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 LYPD3O95274 346 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 IFNA16P05015 189 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 ZGLP1P0C6A0 271 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 DRD5P21918 477 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 CRYBB2P43320 205 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 GABRA4P48169 554 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 FNTBP49356 437 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 PPP5CP53041 499 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 SMARCD3Q6STE5 483 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 CDK20Q8IZL9 346 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 CLDN22Q8N7P3 220 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 BBS1Q8NFJ9 593 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 OR52L1Q8NGH7 329 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 OR51Q1Q8NH59 317 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 GATAD2BQ8WXI9 593 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
NEK3-205ENST00000610828 ZNF559Q9BR84 538 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 SPRTNQ9H040 489 aaPredicted RBP12.6□□□□□ -0.39
NEK3-205ENST00000610828 RERGLQ9H628 205 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 MED17Q9NVC6 651 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 C14orf105Q9NVL8 296 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 ERVK-19Q9WJR5 959 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 CLDN16Q9Y5I7 305 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 MAU2Q9Y6X3 613 aa12.6□□□□□ -0.39
NEK3-205ENST00000610828 PCDH15Q96QU1 1955 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms