RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 OR4K3Q96R72 315 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 GFM1Q96RP9 751 aaKnown RBP3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 GMLQ99445 158 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 MTERF1Q99551 399 aaKnown RBP3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 PKMYT1Q99640 499 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 IFT27Q9BW83 186 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 TEX101Q9BY14 249 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 POLDIP3Q9BY77 421 aaKnown RBP3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 ENKD1Q9H0I2 346 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDT1Q9H211 546 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHST8Q9H2A9 424 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDIP1Q9H305 208 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 MSL2Q9HCI7 577 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 NIT2Q9NQR4 276 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF302Q9NR11 478 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACER3Q9NUN7 267 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 RBM22Q9NW64 420 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAS2R5Q9NYW4 299 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 GDE1Q9NZC3 331 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 AKAP7Q9P0M2 348 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF624Q9P2J8 865 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 COMMD3Q9UBI1 195 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 MGAT4CQ9UBM8 478 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 KCND3Q9UK17 655 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 FZD1Q9UP38 647 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CAMK2AQ9UQM7 478 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CBY1Q9Y3M2 126 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHST2Q9Y4C5 530 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTCH2Q9Y6C5 1203 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 CCDC88CQ9P219 2028 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 DOCK4Q8N1I0 1966 aa3.8□□□□□ -1.8
HMGB1P50-201ENST00000605814 RALGAPA2Q2PPJ7 1873 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 COL11A1P12107 1806 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 A0A0D9SG52 128 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 A0A1W2PQU0 124 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 A0A1W2PRB8 838 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRAMEF25A6NGN4 478 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC9B1P1A6NJY1 282 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR6C75A6NL08 312 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 COLCA2A8K830 154 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 YDJCA8MPS7 323 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 HEPACAM2A8MVW5 462 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 ARHGEF33A8MVX0 844 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 SUPT3HB4E1H0 165 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 F5H423 210 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 NPIPB9F8W1W9 429 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 FAM72CH0Y354 149 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 M0QYT0 321 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 TLR4O00206 839 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR7A17O14581 309 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RFXANKO14593 260 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRODHO43272 600 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 VEGFDO43915 354 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 EIF4E2O60573 245 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 GCM2O75603 506 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPP40O75818 363 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBL3O95164 117 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 GADD45GO95257 159 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTBP3O95758 552 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 IGHV2-5P01817 119 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 TFP02787 698 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 SERPIND1P05546 499 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 CRYBA1P05813 215 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBBP0CG47 229 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBCP0CG48 685 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 STAG3L1P0CL83 205 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 HAPLN1P10915 354 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MYCLP12524 364 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PAX1P15863 534 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPA2P15927 270 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MGMTP16455 207 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF8P17098 575 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 TYRP1P17643 537 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 ELK1P19419 428 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RAB4AP20338 218 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PSMB1P20618 241 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 AGAP20933 346 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRPS1L1P21108 318 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 CNR1P21554 472 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MST1P26927 711 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 LAP3P28838 519 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MPGP29372 298 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 SSTR2P30874 369 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MAS1LP35410 378 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MNDAP41218 407 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 SOX3P41225 446 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTGFRP43088 359 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 XCR1P46094 333 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 HTR5AP47898 357 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 IDH2P48735 452 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RENBPP51606 427 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RIDAP52758 137 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 STC1P52823 247 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 CRYBA2P53672 197 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 OAZ1P54368 228 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDH4P55283 916 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 DLX5P56178 289 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 SMIM11AP58511 58 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAS2R60P59551 318 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 IL2P60568 153 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms