RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 URADA6NGE7 173 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 STX11O75558 287 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IFI30P13284 250 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 GABRG2P18507 467 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PLAURQ03405 335 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 AKAP14Q86UN6 197 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IL17RDQ8NFM7 739 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 BAHD1Q8TBE0 780 aaPredicted RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SPRYD4Q8WW59 207 aaPredicted RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ANKRD19PQ9H560 264 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TRIM45Q9H8W5 580 aaPredicted RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NLGN3Q9NZ94 848 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 COMMD3Q9UBI1 195 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SCML1Q9UN30 329 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CDH10Q9Y6N8 788 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 A0A1W2PQ09 198 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TFECO14948 347 aaPredicted RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ADAM11O75078 769 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RDH16O75452 317 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IL1AP01583 271 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 APOA1P02647 267 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FZD5Q13467 585 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 KCNJ8Q15842 424 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 LRIT3Q3SXY7 679 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 KLBQ86Z14 1044 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ZNF619Q8N2I2 560 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CSNK1A1LQ8N752 337 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 OR4N2Q8NGD1 307 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 OR9A4Q8NGU2 314 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RSC1A1Q92681 617 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SRRQ9GZT4 340 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TMEM165Q9HC07 324 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SIDT1Q9NXL6 827 aaKnown RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MAT2BQ9NZL9 334 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 H2AFY2Q9P0M6 372 aaPredicted RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 USP36Q9P275 1121 aaKnown RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MALT1Q9UDY8 824 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MSRAQ9UJ68 235 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 EXOSC1Q9Y3B2 195 aaKnown RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IQCMA0A1B0GVH7 501 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SLC35F4A4IF30 521 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CD8B2A6NJW9 211 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 HRKO00198 91 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 REM1O75628 298 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RFPL3O75679 317 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 GPR75O95800 540 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CD8BP10966 210 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 IL7P13232 177 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RFX2P48378 723 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SLC9A3P48764 834 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SLC16A1P53985 500 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PRICKLE4Q2TBC4 344 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 KLHL12Q53G59 568 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ARMC4Q5T2S8 1044 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CXXC5Q7LFL8 322 aaKnown RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SAMD14Q8IZD0 417 aaPredicted RBP10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 OR51A7Q8NH64 312 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ASB12Q8WXK4 309 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RFKQ969G6 155 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CCDC32Q9BV29 185 aa10.95□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TRAV27A0A087WT01 109 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TRAPPC13A5PLN9 417 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CDHR4A6H8M9 788 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FABP12A6NFH5 140 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TMEM221A6NGB7 291 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 C2orf74A8MZ97 194 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 STK25O00506 426 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TNFRSF10CO14798 259 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CASKO14936 926 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SEMA4FO95754 770 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 AGR2O95994 175 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ATP1B1P05026 303 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NID1P14543 1247 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 AKT2P31751 481 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 NR4A2P43354 598 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MGAT2Q10469 447 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ERV3-1Q14264 604 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 QSOX2Q6ZRP7 698 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TAF8Q7Z7C8 310 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 RANBP3LQ86VV4 465 aaPredicted RBP10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 OR13C2Q8NGS9 318 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TMEM239Q8WW34 195 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CNOT9Q92600 299 aaKnown RBP10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PTCHD1Q96NR3 888 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PRRG3Q9BZD7 231 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 MCOLN1Q9GZU1 580 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FBRSQ9HAH7 460 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TNFRSF10DQ9UBN6 386 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CD207Q9UJ71 328 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 FBXL4Q9UKA2 621 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 UNC119BA6NIH7 251 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 HRO43593 1189 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 PRKNO60260 465 aaPredicted RBP10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 GALR3O60755 368 aaPredicted RBP10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 TMCC2O75069 709 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 SAGP10523 405 aaPredicted RBP10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 CLUP10909 449 aa10.94□□□□□ -0.66
HMGN3-AS1-201ENST00000604516 ST6GAL1P15907 406 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms