RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HPCAP84074 193 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 CDK6Q00534 326 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 FOXO1Q12778 655 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 MAPK14Q16539 360 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 ZNF630Q2M218 657 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-205ENST00000600117 KLHL26Q53HC5 615 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 FNDC7Q5VTL7 733 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-205ENST00000600117 MARCH3Q86UD3 253 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 TREX2Q9BQ50 279 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-205ENST00000600117 DOHHQ9BU89 302 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 SPATA9Q9BWV2 254 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 HOXD1Q9GZZ0 328 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 QRSL1Q9H0R6 528 aaKnown RBP17.21■□□□□ 0.35
CCDC9-205ENST00000600117 PIF1Q9H611 641 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 TUBA8Q9NY65 449 aaPredicted RBP17.21■□□□□ 0.35
CCDC9-205ENST00000600117 KLRF1Q9NZS2 232 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 CALML5Q9NZT1 146 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 TMEM181Q9P2C4 612 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 SLC5A6Q9Y289 635 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 AP3M1Q9Y2T2 418 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 L3MBTL1Q9Y468 752 aa17.21■□□□□ 0.35
CCDC9-205ENST00000600117 CCDC168Q8NDH2 2452 aa17.21■□□□□ 0.34
CCDC9-205ENST00000600117 A0A0G2JPF8 293 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 A0A1W2PQD3 144 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 C2orf72A6NCS6 295 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 TMEM247A6NEH6 219 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 LRRC3CA6NJW4 275 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 C17orf51A8MQB3 221 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 FAM220BPB1ANY3 271 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 HNRNPCL2B2RXH8 293 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 HNRNPCL3B7ZW38 293 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 KLRC4-KLRK1H3BQV0 150 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 SCO2O43819 266 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 HNRNPCL1O60812 293 aaKnown RBP17.2■□□□□ 0.34
CCDC9-205ENST00000600117 SNX4O95219 450 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 PGM3O95394 542 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 HNRNPCL4P0DMR1 293 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 RPS4Y1P22090 263 aaKnown RBP17.2■□□□□ 0.34
CCDC9-205ENST00000600117 PCGF2P35227 344 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 PMP22Q01453 160 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 LIPEQ05469 1076 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 BNIP1Q12981 228 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 SCARB2Q14108 478 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 GNA13Q14344 377 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 INAQ16352 499 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 REEP3Q6NUK4 255 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 C16orf89Q6UX73 402 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 ZFP62Q8NB50 900 aaPredicted RBP17.2■□□□□ 0.34
CCDC9-205ENST00000600117 C11orf65Q8NCR3 313 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 PMM1Q92871 262 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 TMEM41AQ96HV5 264 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 REXO5Q96IC2 774 aaKnown RBP17.2■□□□□ 0.34
CCDC9-205ENST00000600117 TAAR6Q96RI8 345 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 SPAG4Q9NPE6 437 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 NDE1Q9NXR1 346 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 WIF1Q9Y5W5 379 aa17.2■□□□□ 0.34
CCDC9-205ENST00000600117 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.2■□□□□ 0.34
CCDC9-205ENST00000600117 AGAP5A6NIR3 686 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 B4DXG7 233 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 SNPHO15079 494 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 GSK3BP49841 420 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 PCBP3P57721 371 aaKnown RBP17.19■□□□□ 0.34
CCDC9-205ENST00000600117 EEFSECP57772 596 aaKnown RBP17.19■□□□□ 0.34
CCDC9-205ENST00000600117 KCNJ2P63252 427 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 MXRA7P84157 204 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 CD226Q15762 336 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 VMACQ2NL98 169 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 PDZK1Q5T2W1 519 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 HMGN2P46Q86SG4 172 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 DEFB107AQ8IZN7 70 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 HIPK4Q8NE63 616 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 BBS10Q8TAM1 723 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 OIT3Q8WWZ8 545 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 SLC7A6OSQ96CW6 309 aaPredicted RBP17.19■□□□□ 0.34
CCDC9-205ENST00000600117 TBL1XR1Q9BZK7 514 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 MTHFD2LQ9H903 347 aaPredicted RBP17.19■□□□□ 0.34
CCDC9-205ENST00000600117 TAS2R1Q9NYW7 299 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 SUCOQ9UBS9 1254 aaKnown RBP17.19■□□□□ 0.34
CCDC9-205ENST00000600117 DTNAQ9Y4J8 743 aa17.19■□□□□ 0.34
CCDC9-205ENST00000600117 C5orf58C9J3I9 102 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 SCDO00767 359 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 GCM2O75603 506 aaPredicted RBP17.18■□□□□ 0.34
CCDC9-205ENST00000600117 GLSO94925 669 aaPredicted RBP17.18■□□□□ 0.34
CCDC9-205ENST00000600117 RASAL1O95294 804 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 ANGPTL1O95841 491 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 RNF144AP50876 292 aaPredicted RBP17.18■□□□□ 0.34
CCDC9-205ENST00000600117 RNFT1Q5M7Z0 435 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 ERICH5Q6P6B1 374 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 WDSUB1Q8N9V3 476 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 ZNF527Q8NB42 609 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 FAM98AQ8NCA5 519 aaKnown RBP17.18■□□□□ 0.34
CCDC9-205ENST00000600117 OR2T12Q8NG77 320 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 ZNF597Q96LX8 424 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 RSPO3Q9BXY4 272 aaPredicted RBP17.18■□□□□ 0.34
CCDC9-205ENST00000600117 ALG2Q9H553 416 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 ANGPT4Q9Y264 503 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 NTNG1Q9Y2I2 539 aa17.18■□□□□ 0.34
CCDC9-205ENST00000600117 PRORSD1PA6NEY8 169 aa17.17■□□□□ 0.34
CCDC9-205ENST00000600117 SERINC4A6NH21 518 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms