RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TOX2Q96NM4 488 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 NECTIN4Q96NY8 510 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 NDC1Q9BTX1 674 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 SLCO1C1Q9NYB5 712 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 KCNN3Q9UGI6 736 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 ZNF223Q9UK11 482 aaPredicted RBP12.34□□□□□ -0.43
VRK3-209ENST00000594948 NUP50Q9UKX7 468 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 MGAT4AQ9UM21 535 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
VRK3-209ENST00000594948 TBC1D3KA0A087X1G2 549 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 LOC105371267A0A1B0GV96 52 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 TBC1D3BA6NDS4 549 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 TBC1D3FA6NER0 549 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 BHLHE40O14503 412 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 CTDSPLO15194 276 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 EEF1E1O43324 174 aaKnown RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 PIP5K1CO60331 668 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 UBL3O95164 117 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 TCRBP04435 133 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 TEAD1P28347 426 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 MC3RP41968 323 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 CCDC85BQ15834 202 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 FNDC3BQ53EP0 1204 aaKnown RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 PRPF38BQ5VTL8 546 aaKnown RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 TBC1D3GQ6DHY5 549 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 PLBD1Q6P4A8 553 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ASB18Q6ZVZ8 466 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 FGD2Q7Z6J4 655 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 LNX2Q8N448 690 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 HDDC3Q8N4P3 179 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZNF655Q8N720 491 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 TMEM99Q8N816 258 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZNF680Q8NEM1 530 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ABHD4Q8TB40 342 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ADAMTS15Q8TE58 950 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 TMEM255BQ8WV15 326 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 KISS1RQ969F8 398 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZG16BQ96DA0 208 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZSWIM3Q96MP5 696 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 CMTM3Q96MX0 182 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 SORCS2Q96PQ0 1159 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 FERD3LQ96RJ6 166 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 NRTNQ99748 197 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ACTR6Q9GZN1 396 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 OR52D1Q9H346 318 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZCCHC4Q9H5U6 513 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZNF624Q9P2J8 865 aaPredicted RBP12.33□□□□□ -0.44
VRK3-209ENST00000594948 ZNF780BQ9Y6R6 833 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 NUMA1Q14980 2115 aa12.33□□□□□ -0.44
VRK3-209ENST00000594948 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 TRAV1-2A0A0B4J238 106 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 TEX13CA0A0J9YWL9 993 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 TRAPPC13A5PLN9 417 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 GLOD5A6NK44 160 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 C4orf51C9J302 202 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 CDC42EP2O14613 210 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 DVL2O14641 736 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 FZD7O75084 574 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ZIC2O95409 532 aaPredicted RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 ADH1CP00326 375 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SULT1A3P0DMM9 295 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SULT1A4P0DMN0 295 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 CLCNKAP51800 687 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 PDX1P52945 283 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 EPHA4P54764 986 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 PRMT2P55345 433 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 RGS1Q08116 209 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 NOGQ13253 232 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ARHGAP11BQ3KRB8 267 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 PUS10Q3MIT2 529 aaKnown RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 TOR2AQ5JU69 321 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 RANBP3LQ86VV4 465 aaPredicted RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 NRROSQ86YC3 692 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SLC44A3Q8N4M1 653 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 FANK1Q8TC84 345 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 HAVCR2Q8TDQ0 301 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SLC35A4Q96G79 324 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 HS6ST2Q96MM7 605 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 MS4A4EQ96PG1 132 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ABHD1Q96SE0 405 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 EVA1AQ9H8M9 152 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 HEXA-AS1Q9H8Q6 139 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 MRPS30Q9NP92 439 aaKnown RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 CMC2Q9NRP2 79 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 GLTPQ9NZD2 209 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SLC7A7Q9UM01 511 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 TMEM5Q9Y2B1 443 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 A0A1B0GTQ1 180 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 OR5K3A6NET4 321 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ZSCAN5BA6NJL1 495 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms