RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 LSM1O15116 133 aaKnown RBP18.33■□□□□ 0.52
TRIM47-207ENST00000593089 SS18L1O75177 396 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-207ENST00000593089 SYNGR4O95473 234 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 THBDP07204 575 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 PLPPR5Q32ZL2 321 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 CCNJQ5T5M9 372 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 CPTPQ5TA50 214 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 C20orf204Q6ZNR8 217 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 YTHDF3Q7Z739 585 aaKnown RBP18.33■□□□□ 0.52
TRIM47-207ENST00000593089 CIARTQ8N365 385 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-207ENST00000593089 OR2V1Q8NHB1 315 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 CAVIN3Q969G5 261 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 CHMP6Q96FZ7 201 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 KLHDC3Q9BQ90 382 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 PPCSQ9HAB8 311 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 HHATLQ9HCP6 504 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 UBQLN4Q9NRR5 601 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 PAQR5Q9NXK6 330 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-207ENST00000593089 TMED5Q9Y3A6 229 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 ARID1AO14497 2285 aa18.33■□□□□ 0.52
TRIM47-207ENST00000593089 TMEM233B4DJY2 109 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 H7C1Q1 480 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 SCDO00767 359 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 TRIM13O60858 407 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 HEXAP06865 529 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 PSMA4P25789 261 aaKnown RBP18.32■□□□□ 0.52
TRIM47-207ENST00000593089 SERPINB4P48594 390 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 PRIM2P49643 509 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 RAC1P63000 192 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 CD226Q15762 336 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 RNF165Q6ZSG1 346 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 POC1BQ8TC44 478 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 ACTRT2Q8TDY3 377 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 FAM120BQ96EK7 910 aaKnown RBP18.32■□□□□ 0.52
TRIM47-207ENST00000593089 TRMOQ9BU70 441 aa18.32■□□□□ 0.52
TRIM47-207ENST00000593089 A0A0J9YW62 118 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-207ENST00000593089 C7orf72A4D263 438 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 SMAD7O15105 426 aaKnown RBP18.31■□□□□ 0.52
TRIM47-207ENST00000593089 ADAMDEC1O15204 470 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 LY6G6DO95868 133 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 CHRNGP07510 517 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 BCKDHAP12694 445 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 ME2P23368 584 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 ASMTP46597 345 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 POU6F2P78424 691 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-207ENST00000593089 HBMQ6B0K9 141 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 ZCCHC12Q6PEW1 402 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 STAC2Q6ZMT1 411 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 ESPNLQ6ZVH7 1005 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 R3HCC1LQ7Z5L2 792 aaKnown RBP18.31■□□□□ 0.52
TRIM47-207ENST00000593089 MISPQ8IVT2 679 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 B4GALNT2Q8NHY0 566 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 PPP1R14CQ8TAE6 165 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 TWIST2Q8WVJ9 160 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 CDS1Q92903 461 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 MTERF3Q96E29 417 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 COX4I2Q96KJ9 171 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 C12orf49Q9H741 205 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 SIRT3Q9NTG7 399 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-207ENST00000593089 ZCCHC3Q9NUD5 404 aaKnown RBP18.31■□□□□ 0.52
TRIM47-207ENST00000593089 GIMAP2Q9UG22 337 aa18.31■□□□□ 0.52
TRIM47-207ENST00000593089 A0A1W2PQD3 144 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 FAM171A2A8MVW0 826 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 PIP5K1BO14986 540 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 KLF4O43474 513 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 HMGN2P05204 90 aaKnown RBP18.3■□□□□ 0.52
TRIM47-207ENST00000593089 PPP3CBP16298 524 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 IL11P20809 199 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 LCN1P31025 176 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 HPCAL1P37235 193 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 RNF144AP50876 292 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-207ENST00000593089 LASP1Q14847 261 aaKnown RBP18.3■□□□□ 0.52
TRIM47-207ENST00000593089 BEX5Q5H9J7 111 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 EXOSC6Q5RKV6 272 aaKnown RBP18.3■□□□□ 0.52
TRIM47-207ENST00000593089 PDSS1Q5T2R2 415 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 PRSS57Q6UWY2 283 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 LILRA2Q8N149 483 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 OR7A2PQ8NGA2 310 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 AGR3Q8TD06 166 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 BTBD2Q9BX70 525 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 FANCFQ9NPI8 374 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 GLRX2Q9NS18 164 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 GIN1Q9NXP7 522 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 SNX8Q9Y5X2 465 aa18.3■□□□□ 0.52
TRIM47-207ENST00000593089 TLDC2A0PJX2 215 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 TRIM64A6NGJ6 449 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 TRIM64BA6NI03 449 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 SCAMP2O15127 329 aaKnown RBP18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ALDH3A1P30838 453 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 SFTPDP35247 375 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ZNF117Q03924 483 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 LRIG3Q6UXM1 1119 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ZNF704Q6ZNC4 412 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-207ENST00000593089 BEND4Q6ZU67 534 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 PLEKHM3Q6ZWE6 761 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 STK32CQ86UX6 486 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 TRABD2AQ86V40 505 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 WFDC8Q8IUA0 241 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 EIF1ADQ8N9N8 165 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms