RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 NPAS1Q99742 590 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 NMUR2Q9GZQ4 415 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 PRDM14Q9GZV8 571 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 RABEP2Q9H5N1 569 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 EXD2Q9NVH0 621 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 TRIM33Q9UPN9 1127 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 DTNAQ9Y4J8 743 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 GMEB1Q9Y692 573 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 CLIC1O00299 241 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ANP32DO95626 131 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ACTL6AO96019 429 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 CHRM4P08173 479 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ESRRAP11474 423 aaPredicted RBP13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ETFAP13804 333 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 CPN1P15169 458 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 CHMP24386 653 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ACVR2AP27037 513 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 MSX1P28360 303 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 STARP49675 285 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 KHKP50053 298 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 SEC24CP53992 1094 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 PER3P56645 1201 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 CLDN15P56746 228 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 CHRNEQ04844 493 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 C6orf10Q5SRN2 563 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 CBLN3Q6UW01 205 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 C16orf62Q7Z3J2 963 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 RETREG3Q86VR2 466 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ULK2Q8IYT8 1036 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 C10orf111Q8N326 155 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 C10orf82Q8WW14 230 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 TRNT1Q96Q11 434 aaKnown RBP13.87□□□□□ -0.19
TRIM47-206ENST00000592942 NSRP1Q9H0G5 558 aaKnown RBP13.87□□□□□ -0.19
TRIM47-206ENST00000592942 SLC38A1Q9H2H9 487 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 RUBCNLQ9H714 662 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 SAR1AQ9NR31 198 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 VAPAQ9P0L0 249 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 ICAM5Q9UMF0 924 aa13.87□□□□□ -0.19
TRIM47-206ENST00000592942 RPH3AQ9Y2J0 694 aaPredicted RBP13.87□□□□□ -0.19
TRIM47-206ENST00000592942 PHF3Q92576 2039 aaKnown RBP13.86□□□□□ -0.19
TRIM47-206ENST00000592942 AHRRA9YTQ3 701 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 GMFGO60234 142 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 KIAA0513O60268 411 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 WDR1O75083 606 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 H6PDO95479 791 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 TFPTP0C1Z6 253 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 GLI4P10075 376 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 HPGDP15428 266 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 HK1P19367 917 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 DRD4P21917 467 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 TCEA1P23193 301 aaKnown RBP13.86□□□□□ -0.19
TRIM47-206ENST00000592942 ADH7P40394 386 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 MAGEA8P43361 318 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 LHX2P50458 406 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 NUP107P57740 925 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 TXNL4AP83876 142 aaKnown RBP13.86□□□□□ -0.19
TRIM47-206ENST00000592942 PLAURQ03405 335 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 ZNF117Q03924 483 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 PMPCAQ10713 525 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 GANABQ14697 944 aaKnown RBP13.86□□□□□ -0.19
TRIM47-206ENST00000592942 RGNQ15493 299 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 NDUFAF6Q330K2 333 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 GLYR1Q49A26 553 aaPredicted RBP13.86□□□□□ -0.19
TRIM47-206ENST00000592942 PDZK1Q5T2W1 519 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 ATAD3BQ5T9A4 648 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 MRGPRGQ86SM5 289 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 IFNEQ86WN2 208 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 MISPQ8IVT2 679 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 OR5M1Q8NGP8 315 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 PHOSPHO1Q8TCT1 267 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 TSPEARQ8WU66 669 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 SH3YL1Q96HL8 342 aaPredicted RBP13.86□□□□□ -0.19
TRIM47-206ENST00000592942 TTYH2Q9BSA4 534 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 IKZF5Q9H5V7 419 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 PTGES2Q9H7Z7 377 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 POLE3Q9NRF9 147 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 ALKBH4Q9NXW9 302 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 DKKL1Q9UK85 242 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 LIPT1Q9Y234 373 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 CARD8Q9Y2G2 431 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 ZNF337Q9Y3M9 751 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 WDR45Q9Y484 360 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 LRRK2Q5S007 2527 aa13.86□□□□□ -0.19
TRIM47-206ENST00000592942 HEATR5AQ86XA9 2040 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 SERINC4A6NH21 518 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 SHISA8B8ZZ34 492 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 FBP2O00757 339 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 DNAJA2O60884 412 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 BCAS1O75363 584 aaPredicted RBP13.85□□□□□ -0.19
TRIM47-206ENST00000592942 TNFRSF21O75509 655 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 TOXO94900 526 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 HOXD4P09016 255 aaPredicted RBP13.85□□□□□ -0.19
TRIM47-206ENST00000592942 NUDT7P0C024 238 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 LINGO3P0C6S8 592 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 BMP2P12643 396 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 GABRA1P14867 456 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 PSMA4P25789 261 aaKnown RBP13.85□□□□□ -0.19
TRIM47-206ENST00000592942 CLDN18P56856 261 aa13.85□□□□□ -0.19
TRIM47-206ENST00000592942 MTFR2Q6P444 385 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms