RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 RAP2AP10114 183 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 ITGA3P26006 1051 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 PRKAR1BP31321 381 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 MLF1P58340 268 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 LARS2Q15031 903 aaKnown RBP22.74■■□□□ 1.23
RFX1-205ENST00000589239 H3F3CQ6NXT2 135 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 LYPD8Q6UX82 237 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 CLIP4Q8N3C7 705 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 POP5Q969H6 163 aaKnown RBP22.74■■□□□ 1.23
RFX1-205ENST00000589239 ZNF354BQ96LW1 612 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 CNBD2Q96M20 576 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 MAGIXQ9H6Y5 334 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 UBQLN4Q9NRR5 601 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 ARMC1Q9NVT9 282 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 ZNF232Q9UNY5 417 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 CEPT1Q9Y6K0 416 aa22.74■■□□□ 1.23
RFX1-205ENST00000589239 ZNF891A8MT65 544 aaPredicted RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 TIPRLO75663 272 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 THBS1P07996 1170 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 NID1P14543 1247 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 CDH2P19022 906 aaPredicted RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 ZNF141Q15928 474 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 IFI44LQ53G44 452 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 ARMC10Q8N2F6 343 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 PROX1Q92786 737 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 DPH1Q9BZG8 443 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 CCDC86Q9H6F5 360 aaKnown RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 TRIM45Q9H8W5 580 aaPredicted RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 YARS2Q9Y2Z4 477 aaKnown RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 PCDHGB5Q9Y5G0 923 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 OXSR1O95747 527 aaPredicted RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 SOX3P41225 446 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 EEF1A1P68104 462 aaKnown RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 VLDLRP98155 873 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 CDC20Q12834 499 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 TMEM102Q8N9M5 508 aaPredicted RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 PAPD5Q8NDF8 572 aaKnown RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 FNDC8Q8TC99 324 aa22.73■■□□□ 1.23
RFX1-205ENST00000589239 APOBEC4Q8WW27 367 aaKnown RBP22.73■■□□□ 1.23
RFX1-205ENST00000589239 ACACAQ13085 2346 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 hCG_2039718K7EN88 272 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 HS6ST1O60243 411 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 MRPL2Q5T653 305 aaKnown RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 DHRS4L2Q6PKH6 230 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 APOOLQ6UXV4 268 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 CROCCP3Q8IVE0 287 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 RIMS3Q9UJD0 308 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 CACNA1AO00555 2505 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 FRS3O43559 492 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 BCAS1O75363 584 aaPredicted RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 LGI1O95970 557 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 FBXO45P0C2W1 286 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 HPGDP15428 266 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 KLHL26Q53HC5 615 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 JMJD6Q6NYC1 403 aaPredicted RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 LACC1Q8IV20 430 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 ERI1Q8IV48 349 aaKnown RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 SLC15A4Q8N697 577 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 ZBTB8BQ8NAP8 495 aaPredicted RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 OR4D11Q8NGI4 311 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 VANGL1Q8TAA9 524 aaPredicted RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 GEMIN6Q8WXD5 167 aaKnown RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 SPACA9Q96E40 222 aaPredicted RBP22.72■■□□□ 1.23
RFX1-205ENST00000589239 C7orf34Q96L11 122 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 HOXD1Q9GZZ0 328 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 LHPPQ9H008 270 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 IL1RAPQ9NPH3 570 aa22.72■■□□□ 1.23
RFX1-205ENST00000589239 DOCK10Q96BY6 2186 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 MED13Q9UHV7 2174 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 M0R3H8 397 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 SCDO00767 359 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 NAGAP17050 411 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 TBXA2RP21731 343 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 TMED10P49755 219 aaKnown RBP22.71■■□□□ 1.23
RFX1-205ENST00000589239 CRTC2Q53ET0 693 aaPredicted RBP22.71■■□□□ 1.23
RFX1-205ENST00000589239 ACER2Q5QJU3 275 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 RBM45Q8IUH3 476 aaKnown RBP22.71■■□□□ 1.23
RFX1-205ENST00000589239 LILRA2Q8N149 483 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 ING2Q9H160 280 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 DKK4Q9UBT3 224 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 SLC13A4Q9UKG4 626 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 POLHQ9Y253 713 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 NINQ8N4C6 2090 aa22.71■■□□□ 1.23
RFX1-205ENST00000589239 CAPNS1P04632 268 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 FABP3P05413 133 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 LCN1P31025 176 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 SSR4P51571 173 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 RRADP55042 308 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 PLAURQ03405 335 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 CARM1Q86X55 608 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 ZDHHC21Q8IVQ6 265 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 GALNT16Q8N428 558 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 GATSQ8NAP1 163 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 ZNF527Q8NB42 609 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 OR10G3Q8NGC4 313 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 ASB15Q8WXK1 588 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 LRTOMTQ8WZ04 291 aa22.7■■□□□ 1.23
RFX1-205ENST00000589239 RSL24D1Q9UHA3 163 aaKnown RBP22.7■■□□□ 1.23
RFX1-205ENST00000589239 CDHR4A6H8M9 788 aa22.7■■□□□ 1.22
RFX1-205ENST00000589239 HOXD11P31277 338 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms