RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 DGCR6LQ9BY27 220 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SEMA4CQ9C0C4 833 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 WWTR1Q9GZV5 400 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 IGF2RP11717 2491 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 E9PQ18 207 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 H3BNH8 94 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 OR10H3O60404 316 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 CNOT3O75175 753 aaKnown RBP11.13□□□□□ -0.63
CCBE1-203ENST00000589116 CYP7B1O75881 506 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 CD63P08962 238 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 RYKP34925 604 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 NOVA1P51513 510 aaKnown RBP11.13□□□□□ -0.63
CCBE1-203ENST00000589116 UGT2B15P54855 530 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 EIF3IQ13347 325 aaKnown RBP11.13□□□□□ -0.63
CCBE1-203ENST00000589116 KCTD21Q4G0X4 260 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 FAAH2Q6GMR7 532 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 FAM198BQ6UWH4 519 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 RAB11FIP2Q7L804 512 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 TSPYL5Q86VY4 417 aaPredicted RBP11.13□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF441Q8N8Z8 693 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF527Q8NB42 609 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 ADAMTS16Q8TE57 1224 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 MR1Q95460 341 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 RNF31Q96EP0 1072 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 GAL3ST4Q96RP7 486 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 LPAR4Q99677 370 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 APOL4Q9BPW4 351 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 NIPSNAP1Q9BPW8 284 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 DDA1Q9BW61 102 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 ING2Q9H160 280 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 NDRG4Q9ULP0 352 aaKnown RBP11.13□□□□□ -0.63
CCBE1-203ENST00000589116 SLC35A3Q9Y2D2 325 aa11.13□□□□□ -0.63
CCBE1-203ENST00000589116 FLNBO75369 2602 aaKnown RBP11.13□□□□□ -0.63
CCBE1-203ENST00000589116 TRAPPC13A5PLN9 417 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 CPSF4LA6NMK7 179 aaKnown RBP11.12□□□□□ -0.63
CCBE1-203ENST00000589116 FUT4P22083 530 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 IFNGR2P38484 337 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 ADH7P40394 386 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 NUP107P57740 925 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 ESRRGP62508 458 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 SEC23BQ15437 767 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 LCN10Q6JVE6 187 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 PGBD2Q6P3X8 592 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
CCBE1-203ENST00000589116 CD300LDQ6UXZ3 194 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 CPEB2Q7Z5Q1 589 aaKnown RBP11.12□□□□□ -0.63
CCBE1-203ENST00000589116 GLRX5Q86SX6 157 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 PIP4P1Q86T03 277 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 SLC34A3Q8N130 599 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF786Q8N393 782 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF614Q8N883 585 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
CCBE1-203ENST00000589116 OR4K5Q8NGD3 323 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 OR8K3Q8NH51 312 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 TP53INP1Q96A56 240 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 SLC41A3Q96GZ6 507 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 HRASLS5Q96KN8 279 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 DEPDC7Q96QD5 511 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 TAAR9Q96RI9 348 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 UBQLN4Q9NRR5 601 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 KIF26BQ2KJY2 2108 aa11.12□□□□□ -0.63
CCBE1-203ENST00000589116 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 SERINC4A6NH21 518 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 EIF4E1BA6NMX2 242 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 CSO75390 466 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 GASTP01350 101 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 CYP4B1P13584 511 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 ITIH1P19827 911 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 KRT20P35900 424 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 POLR2IP36954 125 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 CLK3P49761 638 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 PLAURQ03405 335 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 COX10Q12887 443 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 NCF4Q15080 339 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 CCDC157Q569K6 752 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF613Q6PF04 617 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 HSDL2Q6YN16 418 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 SLCO6A1Q86UG4 719 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF440Q8IYI8 595 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 APCDD1LQ8NCL9 501 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 FBLIM1Q8WUP2 373 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 ACOT11Q8WXI4 607 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 PMEPA1Q969W9 287 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 WDR77Q9BQA1 342 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 MRPS26Q9BYN8 205 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 UCK2Q9BZX2 261 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 CTPS2Q9NRF8 586 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 TOR4AQ9NXH8 423 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 B3GALT1Q9Y5Z6 326 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 LOC102723996A0A087X1L8 192 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 TRIM64A6NGJ6 449 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 SEC24DO94855 1032 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms