RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 POM121L2Q96KW2 1035 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 C12orf66Q96MD2 445 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 SLC6A7Q99884 636 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 OPRPNQ99935 248 aaPredicted RBP4.42□□□□□ -1.7
TUBD1-208ENST00000588009 ATF6BQ99941 703 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 SYT11Q9BT88 431 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 MEPEQ9NQ76 525 aaPredicted RBP4.42□□□□□ -1.7
TUBD1-208ENST00000588009 UFSP2Q9NUQ7 469 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 AIPL1Q9NZN9 384 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 PCSK1NQ9UHG2 260 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 NPIPA1Q9UND3 350 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 WDR97A6NE52 1622 aa4.42□□□□□ -1.7
TUBD1-208ENST00000588009 CAMTA1Q9Y6Y1 1673 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 MAGI3Q5TCQ9 1506 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 ARAP3Q8WWN8 1544 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 IGHV3-16A0A0C4DH30 117 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 TRABD2BA6NFA1 517 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 PCP4L1A6NKN8 68 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 FOXI3A8MTJ6 420 aaPredicted RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 ARHGEF9O43307 516 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 TRIM3O75382 744 aaPredicted RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 DBTP11182 482 aaKnown RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 SDC1P18827 310 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 ATP5A1P25705 553 aaKnown RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 OXTRP30559 389 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 AP3M2P53677 418 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 GANABQ14697 944 aaKnown RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 C17orf58Q2M2W7 97 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 C2CD6Q53TS8 623 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 FAM182AQ5T1J6 154 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 C9orf66Q5T8R8 295 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 SLC22A9Q8IVM8 553 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 BPIFB2Q8N4F0 458 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 C4orf32Q8N8J7 132 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 OR1F12Q8NHA8 337 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 TPD52L3Q96J77 140 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 DUSP16Q9BY84 665 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 TUBB1Q9H4B7 451 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 JPT2Q9H910 190 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 SMOXQ9NWM0 555 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 ELOVL2Q9NXB9 296 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 CTSZQ9UBR2 303 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 CDH9Q9ULB4 789 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 RNF24Q9Y225 148 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 MRPL11Q9Y3B7 192 aaKnown RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 MAD1L1Q9Y6D9 718 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 FANCAO15360 1455 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 ZCCHC6Q5VYS8 1495 aaKnown RBP4.41□□□□□ -1.7
TUBD1-208ENST00000588009 FRMPD4Q14CM0 1322 aa4.41□□□□□ -1.7
TUBD1-208ENST00000588009 TCF20Q9UGU0 1960 aaKnown RBP4.4□□□□□ -1.7
TUBD1-208ENST00000588009 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 HELTA6NFD8 242 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 OR6C65A6NJZ3 312 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 FCMRO60667 390 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 SCGNO76038 276 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 CA1P00915 261 aaPredicted RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 SERPINA3P01011 423 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 H2BFMP0C1H6 154 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 TRIM49P0CI25 452 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 TRIM49CP0CI26 452 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 TOP1P11387 765 aaKnown RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 PVRP15151 417 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 CDH5P33151 784 aaPredicted RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 GNPDA1P46926 289 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 MXD4Q14582 209 aaPredicted RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 TMEM44Q2T9K0 475 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 CFAP221Q4G0U5 840 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 VWA2Q5GFL6 755 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 PHYHD1Q5SRE7 291 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 TPGS2Q68CL5 300 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 GCNT7Q6ZNI0 430 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 NLRP9Q7RTR0 991 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 APTXQ7Z2E3 356 aaKnown RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 IFNEQ86WN2 208 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 MIPOL1Q8TD10 442 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 AENQ8WTP8 325 aaKnown RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 ZNF597Q96LX8 424 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 C9orf85Q96MD7 179 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 NPY6RQ99463 290 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 ANP32EQ9BTT0 268 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 VPS37BQ9H9H4 285 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 AMBNQ9NP70 447 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 FAM120CQ9NX05 1096 aaKnown RBP4.4□□□□□ -1.71
TUBD1-208ENST00000588009 MUTYHQ9UIF7 546 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 ZNF221Q9UK13 617 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 BCL9LQ86UU0 1499 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 PNPLA6Q8IY17 1366 aa4.4□□□□□ -1.71
TUBD1-208ENST00000588009 SHANK2Q9UPX8 1470 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 FAM240BA0A1B0GVZ2 78 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 CTAGE15A4D2H0 777 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 EPM2AB3EWF7 344 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 MSH4O15457 936 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 SRPX2O60687 465 aaPredicted RBP4.39□□□□□ -1.71
TUBD1-208ENST00000588009 ECI2O75521 394 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 PNMTP11086 282 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 IGFBP5P24593 272 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 P2RY1P47900 373 aa4.39□□□□□ -1.71
TUBD1-208ENST00000588009 ATP5IP56385 69 aaPredicted RBP4.39□□□□□ -1.71
TUBD1-208ENST00000588009 RPL23AP62750 156 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms